Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq29 98.7 7e-16 >seq29 Length=197879 Score = 98.7 bits (108), Expect = 7e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 33541 GTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTT- 33599 ||||||||| |||| || ||||| || ||||| |||||||||||||| || Sbjct 181109 GTCAAGATCCGCGTGCGTTCGACCCGCATTCCCGAGATTGGCGACAAGTTTGCGTCTCGA 181050 Query 33600 CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGC 33659 ||||| | ||||||| ||| ||| || | ||| || |||||||||||| |||| Sbjct 181049 CACGGTC-AGAAGGGAACGATCGGTATCACCTACCGTCACGAGGACATGCCGTTTTCGGC 180991 Query 33660 CGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACG 33717 ||| ||| | || ||| | ||||||||||||| || |||| |||||||||||| Sbjct 180990 CGAGGGCATCACGCCCGACTTGATCATCAACCCGCACGCCATCCCGTCGCGCATGACG 180933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232922710868