Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq46 158 2e-34 seq71 140 5e-29 >seq46 Length=126363 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||||||||| ||||||||||| || ||||||||||| ||||||||||| || Sbjct 35901 CGTGACAACATCCAAGGTATCACCAAGCCCGCGATCCGTCGTCTCGCTCGTCGTGGCGGT 35960 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| || | ||| | |||||||||||| Sbjct 35961 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACGCGCGGTGTCCTCAAGATCTTCCTC 36020 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | |||| || | || ||| ||||||||||| || || |||||||| ||| Sbjct 36021 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTGACC 36080 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 36081 TCGCTCGACGTCGTCTACGC 36100 >seq71 Length=79543 Score = 140 bits (154), Expect = 5e-29 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || || |||||||| || ||||||||||| || |||||||| || Sbjct 1363 CGTGACAACATCCAGGGCATTACCAAGCCGGCGATCCGTCGTCTCGCCCGTCGTGGCGGT 1422 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| || |||| || |||| || | || | |||||||||||| Sbjct 1423 GTCAAGCGTATCTCTGGCCTGATCTACGAGGAGACGCGCGGCGTCCTCAAGATCTTCCTC 1482 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | |||| || | || ||| ||||||||||| || || |||||||| ||| Sbjct 1483 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTTACC 1542 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || | ||||| || Sbjct 1543 TCGCTCGACGTTGTCTACGC 1562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075057368108