Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=1017535 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 ||||| || || || | |||||||| || ||||||||| |||| | | | | | Sbjct 201358 ACAGTCCCCTGCATCAAGAAGAAAGCCGACTGGGCTATGCGGTGGATC--TCGGACGACC 201301 Query 102168 CGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || | ||||| ||| || || |||| || || || ||||| ||||||||||| | Sbjct 201300 GGTCCATCTTTGGTGAACGCCTGGTCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGG 201241 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | || ||| | || | |||||||||||||| ||||||||||| |||||| ||||| Sbjct 201240 GCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCGGGTCTCACCTTCT 201181 Query 102286 C 102286 | Sbjct 201180 C 201180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741189552320