Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10 122 1e-22 >seq10 Length=415605 Score = 122 bits (134), Expect = 1e-22 Identities = 519/810 (64%), Gaps = 29/810 (4%) Strand=Plus/Plus Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || ||||||||||||||| |||| | |||||||| ||| | || || || || | | Sbjct 14557 GCGTCCTTGTAGAGCATGAAGGGATTGCCCGTCTCGACCTGGGCCTCAAGGATGGCGTAC 14616 Query 106643 CAC-ACATCGGCG----GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 106697 ||| || || ||| | | |||| || ||||| || |||||| ||||||||| Sbjct 14617 CACAACTTCTGCGCCGAGATTGTAC----GC-TTGGCGCGACCCTCCTTCTCGTACTTCT 14671 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGAC 106757 | |||| || ||||| || || ||||| ||| || || |||| | || | Sbjct 14672 CGAAGAGCGCCCTGAACTCGTCGCCGTAGACGTCGTGGAGGCCGGGCGCCTCAGCGGGGC 14731 Query 106758 AGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACA 106817 |||| || | ||| | | || ||| || || | |||||| ||||| || ||||||| Sbjct 14732 AGAACAGCGGCCACTCGGCGTTCTGCTCGACGCGTTCCATGAACAGGTCGGGGATCCACA 14791 Query 106818 GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 106877 | | | ||||| |||| || | ||||| | || ||||| || | || | Sbjct 14792 GCGCGAAGAAGAGGTCTCGCGCGCGGACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCGA 14851 Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG-- 106935 |||| || | ||| || |||||||| |||||||| |||| |||| | || ||| Sbjct 14852 GGAAGTCGAAGATGTCGGCGTGCCACGGCTCAAGGTAGATCGCGAACGCGCCGGGTCGCT 14911 Query 106936 -ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994 || |||| | || || ||||| ||| ||| || ||||| ||||| || | | Sbjct 14912 TGTTGCCTCCTTGGTCCACGTAACGCGCCGTGTTGTTGAAGACGCGGAGCATAGGCACGA 14971 Query 106995 TACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATG 107052 | |||| || | || || || || ||| ||||| | || || | | || Sbjct 14972 TGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTACGA-----ACCGG-TCGCGC-GGAT- 15023 Query 107053 GATGTGCATC------CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 | |||| ||| || || || || || ||| ||||| |||| || | | || Sbjct 15024 GTTGTGAATCGAAAGACCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAG 15083 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | ||||| || | ||| ||||| |||| ||| || |||||||| || | Sbjct 15084 CGTGTCGTAGATGCCTTCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAG 15143 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||||| || ||||| || ||||| || || || | |||||| |||| | | Sbjct 15144 TTGCGGGTGAGGGGTACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTC 15203 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| || ||| || || | || | ||||| ||||||||||||| ||| Sbjct 15204 CGACATCAAGTTGTAGGTTTCGATAGCACGCTTGATGTCGGGTCCGTGGATGCCGACGGC 15263 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA 107346 || ||||| | ||||| || || ||| | |||| |||| ||| | | ||| Sbjct 15264 AACGCGCATGAGCATGTGCTGAGGACGCTCCGCCACTTTGCCGTCGATCCGCAGCAAATA 15323 Query 107347 GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 ||| || ||||||| ||| ||||| Sbjct 15324 CGAGCGCTCGAGAGTTTTGAAACCGAAGTA 15353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979649537440