Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 1e-14 >seq8 Length=472973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 29784 CCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 29843 |||| |||| || |||| |||||| || ||||| || ||||||||||| |||||||| || Sbjct 389626 CCTCGCGAGTTGGGTCTGCAGCGGCTCGACGTGGTCGAGGTAGACGTGGGCGTCTCCGAG 389567 Query 29844 GGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAG 29903 | ||| || || || | |||||||| | || ||||||| ||| | ||| Sbjct 389566 TTGGAGGATGAATTCGTGGGGGACCGTGTCGGTGACGAGGGCGATCATGTGCGTCAAGAG 389507 Query 29904 AGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAG 29963 | ||| |||||||| ||||| || ||||| || | ||| |||| | ||||| | Sbjct 389506 GGCGTACGAAGCGATGTTGAAGGGGACGCCGAGTCCGAGGTCGGCCGAGCGTTGGTACAT 389447 Query 29964 CTGACACGAGAG 29975 | | || ||||| Sbjct 389446 CAGGCAGGAGAG 389435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616823115788