Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 6e-13 >seq19 Length=300983 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||| ||||||| | || | ||| ||||| |||||||||| ||| | || || | || Sbjct 14062 TTTCGACAAACTCGCGGACGGGGTGGGTCTCGCCCGTCGCGAGGACAAAGTCGTCCGGCT 14121 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 | || || || |||||| |||||||| | || || ||||| ||| || |||||||| | Sbjct 14122 CGTCCTGCTGCAGCATGCGCCACATGCCCTCGACGTAGTCACGGGCGTGGCCCCAGTCAC 14181 Query 177677 TGGCAGCGTTGAGGTTACCGAG 177698 |||| |||||||||||| Sbjct 14182 GCTTGGCGTCGAGGTTACCGAG 14203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568436689280