Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01-
26] 156 sequences; 19,393,393 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq10 152 6e-32
seq1 87.8 2e-12
>seq10
Length=415605
Score = 152 bits (168), Expect = 6e-32
Identities = 480/731 (66%), Gaps = 17/731 (2%)
Strand=Plus/Plus
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| |||||| | || | |||||||| |||| || || || || | |
Sbjct 14557 GCGTCCTTGTAGAGCATGAAGGGATTGCCCGTCTCGACCTGGGCCTCAAGGATGGCGTAC 14616
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|| | | || || || | | || ||||| || ||||| | ||||||||| | |
Sbjct 14617 CACAACTTCTGC-GCCGAGATTGTACGCTTGGCGCGACCCTCCTTCTCGTACTTCTCGAA 14675
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
||| || ||||| || || | | || ||| || || |||| | | ||||||||
Sbjct 14676 GAGCGCCCTGAACTCGTCGCCGTAGACGTCGTGGAGGCCGGGCGCCTCAGCGGGGCAGAA 14735
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
|| | ||| | | || ||| || || | |||||| ||||| |||||||| |||||
Sbjct 14736 CAGCGGCCACTCGGCGTTCTGCTCGACGCGTTCCATGAACAGGTCGGGGATCCACAGCGC 14795
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
||||||| || || ||| ||||||| | || || || || | || | ||
Sbjct 14796 GAAGAAGAGGTCTCGCGCGCGGACTTCTTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA 14855
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACG 119182
||| | ||| || ||||||||||| || ||||| | ||||| | || ||| |
Sbjct 14856 GTCGAAGATGTCGGCGTGCCACGGCTCAAGGTAGATCGCGAACGCGCCGGGTCGCTT--G 14913
Query 119183 ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242
| || | |||| || || | ||| ||| ||| || || || ||||| || | |||
Sbjct 14914 TTG-CCTCCTTGGTCCACGTAACGCGCCGTGTTGTTGAAGACGCGGAGCATAGGCACGAT 14972
Query 119243 ACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGG 119300
|||| || | ||| || || || ||| ||||| || | || | || | |||
Sbjct 14973 GCCATTCGAGTAGCCGTTCGTGCCGGCGATGTACGA-AC-CGGTCGCGCGGATGTTGTGA 15030
Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360
|| | ||| || || || || ||| ||||| ||||||| | |||| || ||
Sbjct 15031 ATCGAAAGACCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAGCGTGTCG 15090
Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420
||||| || ||||||||||| ||| | | || |||||||||| ||| | ||| ||
Sbjct 15091 TAGATGCCTTCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAGTTGCGGG 15150
Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480
|| ||||| |||||||| || || || | |||||| |||| | | ||||||
Sbjct 15151 TGAGGGGTACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTCCGACATC 15210
Query 119481 TTGTCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539
|| |||||| || | || || | ||||| ||||| || |||| | || ||
Sbjct 15211 AAGTTGTAGGTTTCGATAGCACGCTTG-ATGTCGGGTCCGTGGATGCCGACGGCAACGCG 15269
Query 119540 CATAAACATGT 119550
||| | |||||
Sbjct 15270 CATGAGCATGT 15280
>seq1
Length=1017535
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Plus
Query 130060 CGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGA 130119
||||||| ||||| ||||||||||| |||||||| | |||||| || | | || ||
Sbjct 201179 CGAGAAGGTGAGACCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAAGCGAACGA 201238
Query 130120 GCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGA 130176
||| ||||||||||| ||||| || |||||||| | || || ||| |||| |||
Sbjct 201239 GCCCGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGACCAGGCGTTCACCAAAGATGGA 201298
Query 130177 GCGGGACTTTGTATCA-AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGA 130235
||| | || | | |||| ||| ||||| | || || |||| ||| || ||||
Sbjct 201299 CCGG----TCGTCCGAGATCCACCGCATAGCCCAGTCGGCTTTCTTCTTGATGCAGGGGA 201354
Query 130236 CGGT 130239
| ||
Sbjct 201355 CTGT 201358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433994051360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |