Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05- 06] 245 sequences; 20,278,264 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq46 87.8 1e-12 >seq46 Length=115527 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||||| || |||||||| || || | |||| | ||||||| ||| |||||| | Sbjct 114652 CCCGAGATCGGTGACAAGTTCGCCTCTCGCCACGGTC-AGAAGGGTACGATCGGCATTAC 114710 Query 33630 GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAA 33689 ||| ||| ||||||||||||| |||| || || | || ||||| ||||||| Sbjct 114711 CTACCGCCACGAGGACATGCCGTTCTCGGCAGAGGGGATCACGCCCGACCTGATCATCAA 114770 Query 33690 CCCGCATGCGTTCCCCTCGCGCATGAC 33716 ||| || || |||||||||||||||| Sbjct 114771 CCCTCACGCCATCCCCTCGCGCATGAC 114797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232536308735