Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05-
06] 245 sequences; 20,278,264 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq145 241 1e-58
>seq145
Length=5427
Score = 241 bits (266), Expect = 1e-58
Identities = 423/615 (69%), Gaps = 6/615 (1%)
Strand=Plus/Plus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||| | |||||| || || ||| ||||||||| ||| | || |||| ||| ||
Sbjct 3575 TACTTCGGCTTCAAGACGCTCGAGCGGTCGTACCTGCTCCGCCTCGACGGCAAGGTGGCC 3634
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
||||||||||| || |||| ||||| ||||| |||| || |||||| ||||||| |
Sbjct 3635 GAGCGACCGCAGCACATGCTCATGCGTGTCGCGGTCGGCATCCACGGCGACGACATTGAG 3694
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCCACCCCG 93900
| | | | | || |||| ||| | |||| ||| ||| | |||
Sbjct 3695 CGCGCGATCGAGACGTACAACCTCATGTCGGA---GCGGTACTTTACGCACGCCTCGCCG 3751
Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAAC 93960
|| || |||||||| || || ||| || ||| | || ||||| ||||| | ||||
Sbjct 3752 ACGCTCTTCAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTCACGATG 3811
Query 93961 AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAA 94020
|||| |||||| ||| || || | ||||| |||||| || ||| |||||| ||
Sbjct 3812 AAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAG 3871
Query 94021 TACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGC 94080
|| || || ||||| || ||||| || | || || | || || |||||| |
Sbjct 3872 ACGGCCGGCGGCATCGGTCTCTCGATCCACAACATCCGCGCGACCGGCTCGTACATCGCC 3931
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || || ||| ||| |||||| || |||| |||||||| || | ||||||| | |||
Sbjct 3932 GGCACGAACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACCGCG 3991
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|||||||| |||||||| || | | | ||| | ||||| |||| ||||||||
Sbjct 3992 CGCTACGTCGACCAGGGCGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTCGAGCCG 4051
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||||| ||| | | ||| ||||||| || |||||||||||||| || ||
Sbjct 4052 TGGCACGCCGACATCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTC 4111
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
| || | ||| | |||| || |||||| | || ||||| || ||| | || ||||||
Sbjct 4112 CGCGCGCGCGACTTGTTCTTTGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAG 4171
Query 94321 AAAAACTCCGCCTGG 94335
| ||| || ||||
Sbjct 4172 CAGAACGGCGACTGG 4186
Score = 138 bits (152), Expect = 1e-27
Identities = 226/318 (71%), Gaps = 6/318 (2%)
Strand=Plus/Plus
Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163
|| || ||||| || || || || |||||||||||| ||||||| ||||||| ||
Sbjct 5093 GCGCCGATGCCGACCGCGTCGACCAGTCAGATCCTTGGCTTCAACGAGGCGTTCGAGCCG 5152
Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223
| ||| |||||| | |||| | | || || |||||||| || |||| ||| |||||
Sbjct 5153 TACACGTCCAACATCTACACCCGCCGTGTCCTCGCCGGCGAGTTCCAAGTCGTCAACCCC 5212
Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACT 95282
||||| || ||||| | || | | || ||||| ||| | | ||||| ||
Sbjct 5213 TGGCTCCTCCGCGACCTCGTCGAC-CGCGGCCTGTGGAACGACGCGATGAAGAA-CACGA 5270
Query 95283 GCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGC 95341
| ||||| ||||||||| |||||||| |||| || || || || |||| ||||
Sbjct 5271 TCATCGCGCACAACGGCTCGATCCAGAACGTCCCCGGTATCCCTGATGAGCTCAA-GCGC 5329
Query 95342 -TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400
|||||||||| |||||||||||| ||||| || | |||||| | | |||| ||||
Sbjct 5330 ATCTACAAGACGGTGTGGGAGATCTCGCAGAAGGTCGTCATCGACCTCTCCGCCGACCGC 5389
Query 95401 GGGCCCTTCATCTGCCAG 95418
|| | |||||| ||||
Sbjct 5390 GGAGCGTTCATCGACCAG 5407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721684910200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |