Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05-
06] 245 sequences; 20,278,264 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq19 134 2e-26
seq203 87.8 2e-12
>seq19
Length=224191
Score = 134 bits (148), Expect = 2e-26
Identities = 275/404 (68%), Gaps = 11/404 (3%)
Strand=Plus/Plus
Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGG 11650
||||||||||||| || ||| |||||||||| ||| || ||||| |||||| |
Sbjct 77088 CGAAACCGTCCATCTCGACGAGGAGCTGGTTGAGGGTCGACTCGCGCTCGTCGTTGCCGC 77147
Query 11651 GCATAC------CACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704
|| || | | |||| |||| | |||| ||||||||||| |||||||| |
Sbjct 77148 -CAAACTGTCCGCCCTTGCCACGAGCTTTT--CCGATCGCGTCAATCTCGTCGATGAAGA 77204
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
||| ||||| ||| ||||| |||| || || || ||||| |||| || |
Sbjct 77205 TGATGCACGGCGCGTTCTTCTTGGCCTGGGCGAAGAGGTCTCGGACACGGCTCGCACCGA 77264
Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGAC 11823
| || ||||||||||| ||||| | | | | || || || | |||||| || |
Sbjct 77265 CTCCGACGAACATCTCGACGAACTCGGAGCCGGAG-ACGGAGAGGAAGGGGACGCCGGCT 77323
Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883
|| || ||| | || |||||||| ||||| || ||||| || | || | ||| | |
Sbjct 77324 TCGCCTGCGGTCGCCTTGGCGAGGAGCGTCTTGCCGGTACCGGGAGGGCCGGAGAGGATG 77383
Query 11884 GCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCC 11943
||||| ||||| ||||||||||| | |||| | || || ||||||||||| |
Sbjct 77384 GCGCCGCGGGGAATCTTGGCACCGAGGCGCTCGTAGTGTTCCGGGTTCTTGAGGAACTTG 77443
Query 11944 ACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAAC 11987
|| | |||| | ||||||||||| ||| || || ||||
Sbjct 77444 ACGAACTCCATGATCTCCTCCTTGGCCTCGTCCATTCCGGCAAC 77487
>seq203
Length=392800
Score = 87.8 bits (96), Expect = 2e-12
Identities = 205/306 (67%), Gaps = 15/306 (5%)
Strand=Plus/Plus
Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651
||| |||||||| || ||||| |||||||||| ||||| | || | ||
Sbjct 125802 GAAGCCGTCCATCTCGGTGAGGAGCTGGTTGAGGGTCTGCTT---------GTGGAAGCT 125852
Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711
| | || ||| ||||| |||||| ||||| | ||| |||||||| |||||
Sbjct 125853 CTGGTCTTTTGGCGAGCGCTTGCCACCGACGGCGTCGAGCTCGTCGATGAAGACGATGGC 125912
Query 11712 CGGTTGGTTGGCACGTGC--CTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCT 11769
|| ||| || || | || ||| || || || ||||| ||| || |||||
Sbjct 125913 GGGAGCGTTCTTGCGGGCAGCAGT--GAAGAGCTCGCGCACACGGCGCGCGCCGACACCG 125970
Query 11770 ACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACC 11828
||| ||||||| |||| | | |||| | | || | |||||| ||| | ||| ||
Sbjct 125971 ACGTACATCTCGTCGAACTCGGACCCAGA-CGCCGAGAAGAAGGGCACACCGGCCTCGCC 126029
Query 11829 AGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCC 11888
|||| ||| || |||||||||||||| || ||||| || | |||| || ||| ||||
Sbjct 126030 TGCGACGGCACGCGCGAGGAGAGTCTTGCCGGTACCGGGAGGGCCAGTCAGGAGGACGCC 126089
Query 11889 ACGGGG 11894
|| ||
Sbjct 126090 GCGAGG 126095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974196261000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |