Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05-
06] 245 sequences; 20,278,264 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq145 150 2e-31
>seq145
Length=5427
Score = 150 bits (166), Expect = 2e-31
Identities = 490/751 (65%), Gaps = 25/751 (3%)
Strand=Plus/Minus
Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634
||||| || ||||||||||||||| |||| | |||||||| ||| | || ||| |
Sbjct 4379 TGTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 4320
Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCG---TTGGCCCGTCCCTCCGCCTCG 106690
| || | ||| | | || | ||| || ||||| | ||||| || |||||| |||
Sbjct 4319 TGGCGTACCAGAGCTTCTG-GGCGGG---AATGGTGCGCTTGGCGCGACCCTCCTTCTCA 4264
Query 106691 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 106750
||||| | | || | | ||||| || || | ||| ||| || ||||||| |
Sbjct 4263 TACTTCTCGAACAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGGCCGGGTGCCTCG 4204
Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810
| || ||||| || | ||| | || || ||| || |||| |||||| ||||| |||
Sbjct 4203 GCAGGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGA 4144
Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870
||||| |||| | || | || | || |||| || | || ||||| ||
Sbjct 4143 ATCCAGAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGG 4084
Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930
| || |||||||| | ||| || |||||||| ||||| || |||| |||| | |||
Sbjct 4083 AGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC 4024
Query 106931 -------TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983
| | | ||||| || | || |||||||| ||| ||| | ||||| ||
Sbjct 4023 GGGCGCTTGTTGCCGCCC----TGGTCGACGTAGCGCGCGGTGTTGTTGTACACGCGGAG 3968
Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCT 107041
||| || || || || | || | || || || || ||| |||||| | ||
Sbjct 3967 CATGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTACGAG--CCGGTCGCG 3910
Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101
| | | ||||| | || || || || ||| ||| ||||| |||| ||| |
Sbjct 3909 CGGATGTTGTGGATCGAGAGACCGATGCCGCCGGCCGTCTTGGAGATGAGCGCGCACGTC 3850
Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161
| || || | ||||| || | ||| ||||| ||||| | | || ||||||||
Sbjct 3849 TTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGAC 3790
Query 107162 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 107221
|| | |||||| || || || || |||||||| || || | ||||| | || ||
Sbjct 3789 GAGAGCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGT-AAAGTA 3731
Query 107222 CC-TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280
|| | ||||| || ||| ||||| | | |||||||| || |||||||||||
Sbjct 3730 CCGCTCCGACATGAGGTTGTACGTCTCGATCGCGCGCTCAATGTCGTCGCCGTGGATGCC 3671
Query 107281 GATGGCCACACGCATAAACATGTATTGGGGT 107311
|| || |||||||| | ||||| || |||
Sbjct 3670 GACCGCGACACGCATGAGCATGTGCTGCGGT 3640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978993183800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |