Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05- 06] 245 sequences; 20,278,264 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq216 87.8 2e-12 >seq216 Length=137410 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 ||||||||||| ||||| |||| || | |||||||| || ||||| | ||| | ||| Sbjct 25288 GAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCCCGTCGGCTTGATCGGC 25229 Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCA 50620 |||||||| | | ||| | ||||||| ||||| || || ||| ||||| |||| || Sbjct 25228 ATGAACGCCACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCGATTGCTTGTCGC- 25170 Query 50621 GCT--GGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATA 50678 ||| || || || || || ||||| ||||| || |||||| | | || Sbjct 25169 GCTCGGGAACGAC--AAGCTGTACAATGCCGAGAACCCGTTCGACTTTATGGAGATGATC 25112 Query 50679 TCGTTGGAGGGCAAAACAAA 50698 ||| |||||||||| || || Sbjct 25111 TCGATGGAGGGCAAGACCAA 25092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488542503834000