Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05-
06] 245 sequences; 20,278,264 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq186 122 9e-23
seq206 105 7e-18
seq217 100 3e-16
seq222 86.0 6e-12
>seq186
Length=108833
Score = 122 bits (134), Expect = 9e-23
Identities = 133/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560
||| |||||||| || || |||||||||||||||||||| || || ||| | |||
Sbjct 59853 CAAAACGAGGTGCAGGGTCGATTCCTTTTGAATGTTGTAATCTTGAAGCGTGCGTCCGTC 59912
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| ||||| || || || || ||||| |||||||| |||||||| ||||| || || ||
Sbjct 59913 CTCAAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 59972
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
||||| || ||||| ||| | ||||||||||| || || ||||| || ||
Sbjct 59973 CTGAATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGAT 60029
>seq206
Length=411018
Score = 105 bits (116), Expect = 7e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 134507 GAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAG 134566
|||||| ||||| || || || | |||||||||||||| || | | || || |||||
Sbjct 70339 GAGGTGGAGCGTCGACTCGTTCTCGATGTTGTAGTCGCCGACTGCGCGATGATCTTCGAG 70398
Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626
|| || ||||| || ||||| |||||||| |||||||| ||||| || || || || |
Sbjct 70399 TTGCTTCCCTGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGGT 70458
Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|| ||||| ||| | |||||| ||||| || || ||||| || ||
Sbjct 70459 CTTGACCTTGACGTCGTAGATTGTGTCCGACGACTCGACCTCGAGCGTGAT 70509
>seq217
Length=194401
Score = 100 bits (110), Expect = 3e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || || || ||||| |||||||||||||| || ||| | ||| |||
Sbjct 61198 ACGAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCG 61139
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| || | |||||||| || || || ||||| || || || ||
Sbjct 61138 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 61079
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|| || ||||| ||| | ||||| ||||| || || ||||| || ||
Sbjct 61078 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGGGTGAT 61026
>seq222
Length=148624
Score = 86.0 bits (94), Expect = 6e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || || || ||||| || ||||||||||| | ||| | ||| |||
Sbjct 94956 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCCTCG 95015
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || ||||| |||||||| ||||| || ||||| || || || ||
Sbjct 95016 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 95075
Query 134625 ATTTT 134629
|| ||
Sbjct 95076 ATCTT 95080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396852217400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |