Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988805.1_202015-05-
06] 245 sequences; 20,278,264 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq186 89.7 3e-13
>seq186
Length=108833
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| ||||| ||||| || ||
Sbjct 60948 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 60889
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | || ||||| || || | || || || ||
Sbjct 60888 GACACGATCGACAATGTCAAGGCCAAGA-TTCAGGACAAGGAGGGCATCCCTCCCGACCA 60830
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || || || || || || || | || ||| | ||||||||
Sbjct 60829 GCAGCGCTTGATCTTCGCGGGGAAGCAGCTCGAGGATGGTCGTACTCTTTCGGATTACAA 60770
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 60769 CATCCAGAAGGAGTCGAC 60752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008590724460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |