Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq208 114 2e-20 >seq208 Length=337538 Score = 114 bits (126), Expect = 2e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 |||| ||||| || |||| ||| || |||| |||| || || | | |||||| Sbjct 334177 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 334118 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188 | || ||| |||||| |||||||||||||||||||| || | | ||| | || |||| Sbjct 334117 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 334058 Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248 ||||| | ||| || |||||| | |||||| || | || || | | ||||||| | || Sbjct 334057 CCGTGCATCCCTCGACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGCT 333998 Query 146249 TGGTGGTCAGCAGGGGGA 146266 |||| ||||| || |||| Sbjct 333997 TGGTCGTCAGGAGCGGGA 333980 Score = 104 bits (114), Expect = 3e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| || ||||| ||||||| |||||||||||||||||| || || | || Sbjct 334731 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGCTGGAGG 334672 Query 145732 ATGAAGTCCCC-GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 ||||| || ||| ||| | | | || | | |||| ||||| |||| || | || Sbjct 334671 ATGAACTCGTGTGGGATCGTGTCG-GAGACGAGAGCGATCATGTGCGTCAAGAGCGCATA 334613 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| |||||||||||||| || || || | ||| | ||||||||||||| |||| Sbjct 334612 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTACATGAGGCA 334553 Query 145851 GGAGAG 145856 |||||| Sbjct 334552 GGAGAG 334547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075192040720