Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq210 145 1e-30 seq52 145 1e-30 >seq210 Length=194087 Score = 145 bits (160), Expect = 1e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 148112 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCTCGCCGTGGTGGT 148171 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| |||| || | |||||||||||| Sbjct 148172 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGTGGCGTCCTCAAGATCTTCCTC 148231 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | |||| || | | ||| ||||||||||| || || ||||| |||||| Sbjct 148232 GAGAACATCATCCGCGACTCGGTTACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 148291 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 148292 TCGCTCGACGTCGTCTACGC 148311 >seq52 Length=42957 Score = 145 bits (160), Expect = 1e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || ||||| ||||| ||||||||||| Sbjct 26333 CTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTCGCTCGTCGTGGC 26392 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| |||| || | |||| || |||| ||| | || | ||||||||| Sbjct 26393 GGTGTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGCGGCGTCCTCAAGATCTTC 26452 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| | | |||| || | || || ||||||||||| || || ||||| ||| Sbjct 26453 CTCGAGAACATCATCCGCGACTCGGTCACGTACACCGAGCACGCCAAGCGCAAGACGGTC 26512 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 ||||| | || |||||||||| Sbjct 26513 ACCTCGCTCGACGTCGTCTATGC 26535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075000681074