Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq207 122 2e-22 seq199 84.2 5e-11 >seq207 Length=219063 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| | || | || ||||| | || || || ||||| || |||| Sbjct 76617 CATG-CCACCGCGCAACCTCAACACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGT 76559 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || ||||||||| ||||| || | || || || |||||||||| ||||| || Sbjct 76558 CGCTGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGG 76499 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||||| || || ||||| || || || || ||||| || || | || || | Sbjct 76498 GAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACT 76439 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 76438 CGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 76387 Score = 100 bits (110), Expect = 7e-16 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || ||||| || | || ||||| ||||||||||| | Sbjct 76912 CATG-CCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATATTATAAT 76854 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || || ||||| || | || || || |||||||||| |||||||| Sbjct 76853 CCGAAAGAGTACGACCGTCCTCGAGCTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCGG 76794 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||||| || |||||||| || || || || ||||| || || | ||| ||| | Sbjct 76793 GAGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACT 76734 Query 288422 CTACTTCGAGCGTGATC 288438 | || ||||| |||||| Sbjct 76733 CGACCTCGAGAGTGATC 76717 >seq199 Length=43429 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 325343 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTA 325402 ||||| || ||||| | | || |||||||||||| | ||| | | ||||||||| Sbjct 35745 TCCTTGCCGCCCTGGAGACGCGTACCGAACTGGCCGTTCGGGTCGAGCACGTTGATGTTG 35686 Query 325403 TTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCA 325462 ||||| |||||| | | ||| || ||| |||||||| || ||||| || || ||||| Sbjct 35685 TTGCTGCCGACAAAGTTCTGCGCGAGGCCGACGATGGTGCCCTGCAGCGAGGCGTCGCCG 35626 Query 325463 TGGTGATAGGC 325473 ||||| || || Sbjct 35625 TGGTGGTACGC 35615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651105077804