Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05-
06] 218 sequences; 20,361,044 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq175 116 8e-21
seq199 87.8 4e-12
>seq175
Length=283523
Score = 116 bits (128), Expect = 8e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
||||||||| | ||||| || || | ||| |||||||| | ||||| | || |
Sbjct 258493 CAAATCATCGCCGAAGCCGTCGAGATCGAGCAGGAATTCCTGACGGACGCCTTGCCC-GT 258551
Query 243559 CGGCTT-ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617
|||||| || ||||||||| | |||||| ||||||||||||| ||||| || |||||
Sbjct 258552 CGGCTTGATCGGCATGAACGCGACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCG 258611
Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTAT 243677
| | |||||||||| | ||||| ||||||| || ||||||| || | ||||||
Sbjct 258612 ATTGCTTGTCGCGCTTGGGAACGAGAAGCTGTACAATGCCGAGAACCCGTTCGACTTTAT 258671
Query 243678 GGAGCTCATTTCG 243690
|||| | || |||
Sbjct 258672 GGAGATGATCTCG 258684
>seq199
Length=43429
Score = 87.8 bits (96), Expect = 4e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 297434 TTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAAC 297493
|| ||||| || || || || || || ||||| || ||||| | | || |||||||
Sbjct 35775 TTCGTGAAGATGTAACGAGCGCTGGCCGCGTCCTTGCCGCCCTGGAGACGCGTACCGAAC 35716
Query 297494 TGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTC 297553
||||| | ||| | | ||||||||| ||||| |||||| | | ||| || |||
Sbjct 35715 TGGCCGTTCGGGTCGAGCACGTTGATGTTGTTGCTGCCGACAAAGTTCTGCGCGAGGCCG 35656
Query 297554 ACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC 297594
|||||||| || ||||| || || ||||| ||||| || ||
Sbjct 35655 ACGATGGTGCCCTGCAGCGAGGCGTCGCCGTGGTGGTACGC 35615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102876919518300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |