Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05-
06] 218 sequences; 20,361,044 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq198 277 2e-69
seq167 136 5e-27
seq187 132 6e-26
>seq198
Length=145707
Score = 277 bits (306), Expect = 2e-69
Identities = 643/965 (67%), Gaps = 7/965 (1%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
|| || || | |||||| || ||||| | || ||||| ||||| ||||| || |||||
Sbjct 111182 TCGCCGGTGAGGATGGCAGCCTGGACGGCGGCGCCGTACGCGACGGCCTCGTCCGGGTTG 111123
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|||| || || | || || ||| || | || || | | | || | ||||
Sbjct 111122 ATCGACTTGTTGGGCTCCTTGCCGCCGAAGAAGTCGGAGACGAGCTTCTGGACACGCGGG 111063
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || ||||| || ||||| | || || || | || | || || ||||| |||
Sbjct 111062 ATACGGGTCGAGCCGCCGACGAGGACAATCTCGTGGACCGACTGCTTGTCAATCTTCGAG 111003
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTC 7248
|| || || || ||||| || ||||| | | | ||||| | |||| || || ||
Sbjct 111002 TCGCGGAGGACCTTCTCGACGGGCTCCAT-CGTCGAGCGGAAGAGGTCCTGGCAGAGCTC 110944
Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308
||| || || || ||||| || || || ||||| || | ||| ||| | | ||| || ||
Sbjct 110943 CTCGAAGCGGGCGCGGGTGATCGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGAT 110884
Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368
|| ||||| || || || | ||| || | || ||||| |||||||| || || || ||
Sbjct 110883 CTCGATGGTGGTCTGGGCGGCCGACGAGAGGGTGCGCTTGGCGCGCTCGCAAGCGGTGCG 110824
Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428
| ||| || ||||| || | ||| || | || ||||| | || || || |||||
Sbjct 110823 GAGACGGCGGAGGGCGCGGGCGTTCGACGAGAGGTCCTTCTTGTTCTTGCGCTTGAACTC 110764
Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
| ||||| | ||| | || || || ||||| || | ||| || || ||
Sbjct 110763 GGCGACAAAGTGGTTGACGAGGCGGTTGTCAAAGTCCTCACCGCCGAGGTGGGTGTCTCC 110704
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
|| ||||| ||||| || ||||| || | || || | | | ||| || || |||||
Sbjct 110703 GGCAGTCGCCTTGACCTCGAAGATGCCCTCCTCGATCGTGAGGAGCGAGACGTCGAACGT 110644
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608
|| || |||| |||||| ||||| |||||| | ||| | || ||||| ||||| ||
Sbjct 110643 GCCGCCGCCCAAGTCAAAGATGAGGACGTTCTTCTCGCCCTCGGACTTCTTGTCGAGGCC 110584
Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668
||||||||| || || || || || || || || || || || ||| ||||| | ||
Sbjct 110583 GTACGCGATGGCGGCGGCGGTGGGCTCGTTGATGATGCGGAGGACGTTGAGGCCCGAGAT 110524
Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728
| || || || || || || || ||||| ||||| |||||||| ||||| || ||
Sbjct 110523 CAAGCCGGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGAC 110464
Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788
||| |||| | ||| | ||||| || | || || | || ||||| ||| ||
Sbjct 110463 GACGGCGTTGGCGACCGTGCCGCCGAGGTAGGCCTCGGCCGTCTCCTTCATCTTGAGGAG 110404
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848
|||||||| || ||||| || | || |||| ||| || || || | || ||
Sbjct 110403 GACCATCGACGAGATCTCCTCGGGCGTGAACTCCTTCTGCTCGCCCTTGTACTCGACCGA 110344
Query 7849 AATCATGGGTTTATCCGCAGCAC-CGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907
|| ||||| || ||| || | ||| ||||| ||| ||| | ||||| |||
Sbjct 110343 GATGATGGGCTTGCCCG----ACTTGTCGATGACCTTGAACGGCCAGTGCTTCATGTCGG 110288
Query 7908 CTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGT 7967
||||||| ||| | |||||| | |||||| || ||||| || || || || |||
Sbjct 110287 ACTGGACCTCGGCGTCGGCAAACTTGCGTCCGATGAGGCGCTTGGCGTCGAAGACGGTGC 110228
Query 7968 TTTTG 7972
| |||
Sbjct 110227 TGTTG 110223
>seq167
Length=562576
Score = 136 bits (150), Expect = 5e-27
Identities = 523/812 (64%), Gaps = 27/812 (3%)
Strand=Plus/Plus
Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072
|| || | || |||||| ||||| | || ||||| ||||| ||||| |||||||| |||
Sbjct 518091 CCGGTGAGGACGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCGTCGGGGTTGATC 518150
Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132
| || || || | ||| || | || || | | || || || |||||
Sbjct 518151 GACTTGTTGAGCTGGCGGCCGCCGAAGAACTCGGAGACGAGCGACTGGATCTTGGGGATA 518210
Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC- 7191
|| ||||| |||||||| | || || || | || || || || |||||||| | |||
Sbjct 518211 CGGGTCGAGCCACCGACGAGGACAATGTCGTCAACCTTGGACTTGTCGATCTTGGCGTCC 518270
Query 7192 -TC--GAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248
|| || | | | |||| || || | |||||| ||| | | ||
Sbjct 518271 TTCAAGACGCGCT----CGACGGGGTCGAGGGTCGAGCGGAAC--GTCGCGGCGTTGATC 518324
Query 7249 --CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
|||||| || ||||| | || || | |||| || ||| | | | | ||| ||
Sbjct 518325 TCCTCAAAGCGGGCACGCGAGATCGAGGCCGAGAAGTCCTGGCCCTGGAAGAGCGAGTCG 518384
Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364
| || | ||| || || || || || || | || ||||| || ||||| |||||||
Sbjct 518385 ACCTCGACGGTGGTCTGGGTGACG--GACGAGAGGGTGCGCTTGGCACGCTCGCACGCCG 518442
Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424
|| | ||| || || || || | || || || || || ||| || || | ||
Sbjct 518443 AGCGGAGACGGCGGAGCGCGCGGGCGTCGCCCGAGATGTCGAGCTTGGTCTTGCGCTCAA 518502
Query 7425 ACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483
|||| | |||||| |||| |||| | || || || ||||| || | ||| ||
Sbjct 518503 ACTCCTTCTTGAAGTGCTCGA-GGAGCGTGTTGTCAAAGTCCTCACCGCCGAGGTGGGTG 518561
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || || ||||| ||||| |||||| || || || | | ||| |||||
Sbjct 518562 TCTCCGGCCGTCGCCTTGACGGCAAAGACGCCACCGGTGATCGAGAGGAGCGAGACATCG 518621
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-------CGTCTTTGTT 7596
||||| || || || ||||| || ||||| || || | || | | ||| ||
Sbjct 518622 AACGTGCCGCCTCCGAGGTCGAAGATGAGGACAATCTTCTCCTTCTTCGACTTCTCGGTC 518681
Query 7597 --CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
|| |||||||||||||||| || ||||| || || || || || || || || |
Sbjct 518682 GCCTCGCCGAGACCGTACGCGATGGCAGCCGCGGTGGGCTCGTTGATGATGCGGAGGACG 518741
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
| |||||||| || || | || || || |||| | || ||||| ||||| ||||||
Sbjct 518742 TCGAGGCCAGCGATCGTGCCAGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAG 518801
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| |||||||| | ||| || | | |||| | ||| || | | | || || | ||
Sbjct 518802 GCAGGGACCGTGATGACGGCCTTCTTGACCTCCTTGCCAATCTTGGCCTCGGCCGTCTCC 518861
Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTC 7806
|| | |||| |||||||| | || |||||
Sbjct 518862 TTGAGCTTGGAGAGAACCATGGCCGAGATCTC 518893
>seq187
Length=297707
Score = 132 bits (146), Expect = 6e-26
Identities = 420/647 (65%), Gaps = 12/647 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || || || || | ||| || || || ||||| || |||||| || | |||
Sbjct 1280 TCAAAGTCCTCGCCGCCGAGGTGGGTGTCACCGGCGGTGGCGAGGACTTCGAACACACCG 1339
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| || || ||||| || || || ||||| | | || | |
Sbjct 1340 TCGTCGATCGAGAGGAGCGAGACGTCGAACGTGCCGCCGCCGAGGTCGTAGACGATGATG 1399
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| || | | |||| ||||| ||||||||||| || || ||||| || ||
Sbjct 1400 TTGCGCTCGCCGCC---GGTCTTGTCGAGTCCGTACGCGATCGCGGCGGCCGTCGGCTCG 1456
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | || || ||| || || || || || | || || || || || || ||
Sbjct 1457 TTGACGACGCGGAGGACGTTGAGACCCGCGATCGTGCCGGCGTCCTTGGTGGCCTGGCGC 1516
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| |||||| || | |||||
Sbjct 1517 TGGGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGCGTGACCTTGGTTCCGAGG 1576
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|||| || || | || ||||| ||| || ||||| | || | ||| || | |
Sbjct 1577 TACGTCTCGGCCGTCTCCTTCATCTTGCCGAGGACCATGGCCGAGACCTCCTCGGGGGTG 1636
Query 7817 AA---CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873
|| || || | || ||| | | || || |||| ||| | | || | |||
Sbjct 1637 AATGTCTTGCTCTTGTCGCCG---ACCTTGACCTCGATCACGGGCTGCTTCGTCGAGCCG 1693
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
| | ||||| ||| | | |||| ||| ||||||| | ||| |||
Sbjct 1694 GCCTTGACCTTGAACGGGTAGTGCGTCATGTCGCGCTGGACCTCCTTGTCGTCAAAGCGG 1753
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| |||||| || ||||| || ||||| | ||||| | |||||| ||| ||||||
Sbjct 1754 CGTCCGATCAGGCGCTTGGCGTCAAAGATCGTGTTGGTCGGGTTCGAGGCGTACTGGTTC 1813
Query 7994 TTCGCCGCGTCCCCGATAAGACGTT--CATTATTTTCCGTA-AACGCGACGTACGATGGG 8050
|| || ||||| ||||| || || | | | | | || |||||||| || |||
Sbjct 1814 TTGGCGGCGTCGCCGATCAGGCGCTCGCCGGACGAGGGGGAGAAGGCGACGTAGGACGGG 1873
Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097
|| | || || || |||||||| || || || || ||||| ||||
Sbjct 1874 GTGATGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACGCGACCGTT 1920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131069263120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |