Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05-
06] 218 sequences; 20,361,044 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq196 141 1e-28
>seq196
Length=101194
Score = 141 bits (156), Expect = 1e-28
Identities = 485/747 (65%), Gaps = 17/747 (2%)
Strand=Plus/Minus
Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634
||||| |||||||||||||||||| |||| | |||||||| ||| | || ||| |
Sbjct 13810 TGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 13751
Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693
|| | ||| | | || | ||| || | || ||||| || |||||| |||||||
Sbjct 13750 CGGCGTACCAGAGCTTCTG-GGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 13692
Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
||| |||| | | ||||| || || | ||| |||||| || |||| | |
Sbjct 13691 TTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCC 13632
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | || || ||| || |||| |||||| ||||| || |||
Sbjct 13631 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATC 13572
Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873
|| |||| | || | || | || |||| || | || ||||| || |
Sbjct 13571 CAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 13512
Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933
|| |||||||| | ||| || |||||||| ||||| || |||| |||| | |||
Sbjct 13511 TCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC--- 13455
Query 106934 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987
| ||| || | || | || |||||||| ||| ||| | ||||| |||||
Sbjct 13454 GGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 13395
Query 106988 GGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCA 107045
|| || || || | || | || || || || ||| ||| || | || | |
Sbjct 13394 GGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAC--GAACCGGTCGCGCGGA 13337
Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105
| ||||| | || || || || ||| ||| ||||| |||| ||| | | |
Sbjct 13336 TGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGA 13277
Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165
| || | ||||| || | ||| ||||| ||||| | | || |||||||| || |
Sbjct 13276 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGA 13217
Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-T 107224
|||||| || || || || |||||||| || || | ||||| | || ||||
Sbjct 13216 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACCGC 13158
Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284
| ||||| || ||| ||||| | | |||||||| || |||||||||||||
Sbjct 13157 TCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACC 13098
Query 107285 GCCACACGCATAAACATGTATTGGGGT 107311
|| || ||||| | ||||| || |||
Sbjct 13097 GCGACGCGCATGAGCATGTGCTGCGGT 13071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979192302320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |