Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05-
06] 218 sequences; 20,361,044 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq79 87.8 5e-12
>seq79
Length=666268
Score = 87.8 bits (96), Expect = 5e-12
Identities = 120/166 (72%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763
||| |||| |||||||| |||||||||||||| | |||| ||||| |||||| ||||||
Sbjct 551835 GAGTTCTCGACGAAACCGCGCGCCTCGGGCGAGTAGTCGTCCTTGGCAAAGTGCGGCAGG 551776
Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC 302823
|| | || || ||||| | || ||||| || || || ||||||| || | ||
Sbjct 551775 GTGCGGTACTTGAAGCCGAACGGACACCGCTTGCCCTCGACAATCTGCTGACCGACACAA 551716
Query 302824 GAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCCAGC 302867
| ||||||||| || || | || | |||||| ||||| ||
Sbjct 551715 GCCGACATCTGCGAGATGTTGATGAACGA--GCCCTTCGAGCCGGC 551672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471813489029466
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |