Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq196 289 3e-72 seq165 176 6e-38 seq175 140 4e-27 seq212 138 1e-26 seq79 131 2e-24 seq204 120 4e-21 seq200 114 2e-19 seq182 105 8e-17 >seq196 Length=101194 Score = 289 bits (320), Expect = 3e-72 Identities = 296/388 (76%), Gaps = 15/388 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||||||||||| ||| | |||||||||||||| | || |||||| || Sbjct 13437 CTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 13378 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||| ||||| || | ||| | |||| ||||| | ||||| | | ||| Sbjct 13377 GTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCC 13318 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 13317 GATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCCTC 13258 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| ||||||| ||||| |||||||||||| |||||||||| |||||| Sbjct 13257 GATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGTGCC 13198 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||||||| |||| ||| || || || || ||||||| || ||| || Sbjct 13197 GGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTACGT 13138 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 ||| | |||| ||| | |||| | || | | ||||| ||||| Sbjct 13137 CTCGATCGCGCG------------GTCAATGTCGTC---GCCGTGGATGCCGACCGCGAC 13093 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCG 1630452 |||||||||||||| ||| || |||||| Sbjct 13092 GCGCATGAGCATGTGCTGCGGTCGCTCG 13065 Score = 187 bits (206), Expect = 3e-41 Identities = 355/508 (70%), Gaps = 20/508 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 |||||||||||| |||| ||||||| || |||| | | |||||| || ||||||||||| Sbjct 14983 CTGGTCGACGGTGAACTTGATGGCGCCGACGGCAGCGCGGGTGCGGAGGTAGTACATGCC 14924 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGA--TGCG-CTCGGGCGT 1627097 |||||||| || ||| ||||| |||||||||||||| |||| | || || Sbjct 14923 CGTCTTGAGACCTTTCTTCCATCCGTAGAAGTGCATCGACGTGAGCTGCGCCATGGTCG- 14865 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 ||| | | | || | |||||||||||| |||||||| | | |||| ||||| Sbjct 14864 -GCGAC-GAGAGGTGGACGTTGAGCGACTGCGACTGGTCGATGAACGCGCCGCGGTCGGC 14807 Query 1627158 CGCCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAG 1627217 || | ||||||| |||| | | | |||||||||||||||| ||||| |||||| Sbjct 14806 GGCGAGGTCGATGACGACCTTTTGCGAGATCTCCCACACGGTCTTGTAGATGCGCTTGAG 14747 Query 1627218 GTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCT 1627277 || | ||| | | || | | ||| | |||||||| ||||| || | | Sbjct 14746 CTC-GTCGG-----GGATGCCGGGGACGTTCTGGATCGAGCCGTTGTGCGCGATGATCGT 14693 Query 1627278 GTCGCGAAAGTCG-GGCG-TCCACAGGCCGCGCGCCATCAGG-CGCTTGACCAGGTGGCG 1627334 || | ||| | || ||||||||||||| | | ||| ||| || || | | Sbjct 14692 GTTCTTCA--TCGCGTCGTTCCACAGGCCGCGGTCGACGAGGTCGC-GGAGGAGCCAGGG 14636 Query 1627335 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGAC 1627394 |||||| || || ||||| | ||| |||||||| |||||||||||| ||| Sbjct 14635 GTTGACGACCTGGAACTCGCCGGCGAGGACGCGGCGGGTGTAGATGTTGGACGTGTACGG 14576 Query 1627395 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC-CA 1627453 |||| |||||||| || ||| |||||||| |||| ||| || ||||| |||| || Sbjct 14575 CTCGAACGCCTCGTTGAAGCCGAGGATCTGGCTGGTCGAGGCGGTAGGCATCGGCGCGCA 14516 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG 1627481 | | |||||||||||| | ||||||||| Sbjct 14515 C-ACGAGCGAGTTGCGGATGCCGTGCTG 14489 Score = 167 bits (184), Expect = 3e-35 Identities = 260/377 (69%), Gaps = 10/377 (3%) Strand=Plus/Minus Query 1628229 GTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGAT 1628288 |||| |||| ||||||| ||||||| |||| ||| ||||||| ||| ||| ||| || Sbjct 13809 GTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGAC 13750 Query 1628289 GGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNNNNNNNNN 1628345 ||| |||||| || | ||||| | | || ||| ||||| |||| Sbjct 13749 GGCGTACCAGAGCTTCTGGGCGGGGATG---GTGCGCTTGGCGCGACCCTCCTTCTCGTA 13693 Query 1628346 NNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGA 1628405 | || | |||||||| |||||| || ||||||||||||| Sbjct 13692 CTTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGC 13633 Query 1628406 CGGACAAAAGAGCGACCAGTCGCCA--CCGGTCACCGCGCGGCGCATAAAGAGGTCACAC 1628463 ||| || ||||| | ||||||||| | | || | ||| | || |||||||| Sbjct 13632 CGGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCC--ATGAAGAGGTCGGGG 13575 Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 |||| || || | || | ||||||||| ||| ||||||||||||||||||||| | Sbjct 13574 ATCCAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGG 13515 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 1628583 |||||||| | |||| |||||||||||||||||||| |||||| ||| || |||||| Sbjct 13514 AGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC 13455 Query 1628584 TTGCGCTTGCCGCCGCC 1628600 ||||||| ||| || Sbjct 13454 GGGCGCTTGTTGCCTCC 13438 >seq165 Length=391853 Score = 176 bits (194), Expect = 6e-38 Identities = 203/271 (75%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 868727 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAG 868786 |||||||||||||| | |||||||| |||||| | ||||||||| | | | |||| Sbjct 47716 TTGGTCTTGCCCTCCATCGAGATCATCTCCATGAAGTCGAACGGGTTCTCCTTGTGGTAG 47775 Query 868787 TGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCAC 868846 ||| ||| || || | | |||| ||||||||| ||||||||||||||||||||| Sbjct 47776 ATCTTCTCGTTGCCAAGTGCGACAAGCAAGCGGTCGGCAACAAACTCGATGTACTGGCAC 47835 Query 868847 ATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTC 868906 |||||| || |||||||||||||||| || ||||||| ||| | | ||||||| | Sbjct 47836 ATGAGGTCGCTGTTCATGCCGATGAGCTTGACGGGCAGCGCCTCCGTGAGGAACTCTTGC 47895 Query 868907 TCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTC-GGCCGAGGGCTTGTTGAC 868965 ||||||||||| |||||| |||||| || | | ||| || |||||| | | Sbjct 47896 TCGATCTCGACCGCCTCGCGGATGATGCGCTCGACCGTGTCGGGGTGAGGGC-GGCGCTC 47954 Query 868966 GAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 868996 ||| || | |||| ||||||||||||||| Sbjct 47955 GAGGTGCGAGAAGAGGAGGCAGGCAAAGTCG 47985 Score = 118 bits (130), Expect = 1e-20 Identities = 126/163 (77%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCC 869268 |||| ||| |||||||| | |||||||||||||||||| ||||||| ||| ||| ||| Sbjct 48122 AAGGTGAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCC 48180 Query 869269 CGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAG 869328 ||||| |||||||||||||||||||| || ||| ||| |||||| | ||| | | | Sbjct 48181 GGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAAGACGGAGCG 48240 Query 869329 GCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTC 869371 | | ||| |||||| | | |||||| |||||||| ||| Sbjct 48241 GTCGTCC---GAGATCCAGGTGAGCGCCCACTCGGCCTTCTTC 48280 >seq175 Length=283523 Score = 140 bits (154), Expect = 4e-27 Identities = 199/275 (72%), Gaps = 10/275 (4%) Strand=Plus/Minus Query 868727 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAG 868786 |||||||||||||| | |||||||| |||||| | ||||||||| | ||||| Sbjct 258701 TTGGTCTTGCCCTCCATCGAGATCATCTCCATAAAGTCGAACGGGTTCTCGGCATTGTAC 258642 Query 868787 TGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCAC 868846 |||| ||| || |||| | |||| ||||| ||||| |||||||||||||| | | Sbjct 258641 AGCTTCTCGTTCCCAAGCGCGACAAGCAATCGGTCCGCGACGAACTCGATGTACTGTCGC 258582 Query 868847 ATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTC 868906 |||||| |||||||||||||| | | || |||| | || ||| || || | | Sbjct 258581 ATGAGGGTCGCGTTCATGCCGATCAAGCCGACGGGCAAGGCGTCCGTCAGGAATTCCTGC 258522 Query 868907 TCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCGGCCGAGG-GCTTGTTG-- 868963 |||||||||||||| ||| ||||||| || || ||| ||| |||| ||| || | Sbjct 258521 TCGATCTCGACGGCTTCGGCGATGATTTG---GGCGACG-CGG-TGAGGCGCTGGTCGGC 258467 Query 868964 --ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 868996 |||| || | |||| ||||||||||||||| Sbjct 258466 GCTCGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCG 258432 >seq212 Length=170411 Score = 138 bits (152), Expect = 1e-26 Identities = 250/359 (70%), Gaps = 15/359 (4%) Strand=Plus/Minus Query 732334 AGCCCTTTACGCACGTCGAGGTGCACCCGCTGCTCATGCTCGGGGCCTGCGCGTCCATCA 732393 || ||| |||||| |||| | ||||| | || ||||| |||||||||||||| Sbjct 60763 AGACCTGGACGCACTGCGAGATCCACCCTTCCATGATCCTCGGCATCTGCGCGTCCATCA 60704 Query 732394 TCCCGTTCTCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGC 732453 |||| ||| || ||||||||||| | |||||||||| ||||||| | ||||||||||||| Sbjct 60703 TCCCCTTCCCCGACCACAACCAGTCCCCGCGCAACACCTACCAGTCTGCCATGGGCAAGC 60644 Query 732454 AGAGCAAGGCCGTCGTGTCGCTCAACGCCGACCA---CGCCATCGACACGGTGTCGCACG 732510 || || | | | || | |||| | | |||| | ||| |||||| || | || Sbjct 60643 AG-GCTATG--GGTGTCTACCTCACCAACTACCAGGTCCGCATGGACACGATGGCCAACA 60587 Query 732511 CCCTGTGCTACCCGCAGGTGCCGCTGGTGCAGAC---CGCCATGGAGGACGTCATCGGCG 732567 ||| | ||||||||| ||| || | | ||| | | |||||| || || | Sbjct 60586 TCCTCTACTACCCGCAAAAGCCCCTCGCGACGACGCGCTCGATGGAGTACCTC--CACTT 60529 Query 732568 CCACGCGCCTCCCGATGGGCCAGAATGCGCGCGTGGCCATCATGAGCGACCC---CTACA 732624 || || || |||| || ||||| || ||| |||||| || || || | ||||| Sbjct 60528 CCGCGAGCTGCCCG-CCGGACAGAACGCCATCGTCGCCATCCTGTGCTACTCCGGCTACA 60470 Query 732625 ACCAGGAGGACTCGCTCGTGCTCAAGCAGGACTTTGTCGACCGCGGCGGCTTCCGCTCG 732683 |||||||||| ||| || | | || ||| || ||||||||||| ||||||||| Sbjct 60469 ACCAGGAGGATTCGGTCATCATGAACCAGTCCTCGATCGACCGCGGCCTGTTCCGCTCG 60411 Score = 105 bits (116), Expect = 8e-17 Identities = 323/488 (66%), Gaps = 25/488 (5%) Strand=Plus/Minus Query 733082 GCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAG--C 733139 ||| ||| | || ||||| | | || |||||||| || ||||| || | |||| | Sbjct 60051 GCCAGAGATTGGTGACAAGTTCGCCTCTCGCCACGGTCAGAAGGGTACGATCGGCATTAC 59992 Query 733140 GTGCGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTG 733199 | | | |||| ||||||||||| | || |||| || || |||||||||| | | Sbjct 59991 CTAC-CGCCAC-GAGGACATGCCGT--TCTCCGC-CGAGGGGATCACGCCCGACCTGATC 59937 Query 733200 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCTG 733259 |||||||| ||||||||||| || ||||||||||| ||| | || ||||| || ||| Sbjct 59936 ATCAACCCTCACGCCATCCCCTCCCGCATGACCATCGGCCACTTGGTCGAGTGTCTGCTG 59877 Query 733260 GGCAAGGTGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGGCGGCGTCACC 733319 ||||||| | | ||| || ||||||| ||||| || || ||||| Sbjct 59876 TCCAAGGTGTCGACAATCACCGGCAACGAAGGCGACGCAACGCCGTTCTCCGAGGTCAC- 59818 Query 733320 NNNNNNNNNNNNNNNNNNGAGTTGGCCCGC---CACGGGTGCGA-GCGCTACGGCAAGGA 733375 || || |||| |||| | | | ||| |||| || Sbjct 59817 --GGTCGAGGCCATCTCGGAACTGCTCCGCAAGTACGGCTACCACTCGC-GCGGCCTCGA 59761 Query 733376 GGTGCTCTACCACCCGCACACCGG-CG--AGC-CCATGGCGGCGTTGATCT-TCTCGGCG 733430 ||| | ||| || |||||||| || ||| ||| |||| | ||| |||||| Sbjct 59760 GGTCATGTACAACGGCCACACCGGTCGTAAGCTCCA----GGCGCAGGTCTACCTCGGC- 59706 Query 733431 CCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGCCCGCGC 733490 ||| |||||||||| |||| |||| ||| | ||| |||||||| || ||| ||||| Sbjct 59705 CCGACCTACTACCAGCGCCTCAAGCACATGGTCGGCGATAAGATCCATGCTCGCGCGCGC 59646 Query 733491 GGTCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGCTCGGGCGGCTTC 733550 || || |||||||| || ||| ||||| |||||||| || ||| | || ||||| Sbjct 59645 GGCCCTGTGCAGATCCTGACCCGCCAGCCCGTCGAGGGTCGTTCGAGGGACGGTGGCTTG 59586 Query 733551 CGTCTCGG 733558 || |||| Sbjct 59585 CGGTTCGG 59578 >seq79 Length=666268 Score = 131 bits (144), Expect = 2e-24 Identities = 205/291 (70%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 507581 CTCCAGATCGGGTGGTCGGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAAC 507640 |||||| ||| ||| |||||||| ||||| | |||||| ||| || | ||| Sbjct 550703 CTCCAGTACGGCTGGATTGTCGAGCGACACCTCAAGGACGGCGACATCGTCCTGTTCAAC 550762 Query 507641 CGGCAGCCGTCGCTGCACATGGGCTCCATGCTCATGCACAAGGTGGTGCCCATGCCCGGG 507700 |||||||||||| |||||| | || ||| | |||| || || |||||| | Sbjct 550763 CGGCAGCCGTCGTTGCACAAGATGTCGATGATGGCGCACCGCGTCAAGCTCATGCC-GTA 550821 Query 507701 CGC-ACCATGCGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGA 507759 | | ||| | || ||||||| | ||||| | ||||||||||||||||||||||| Sbjct 550822 CTCGACCTTCCGCCTCAACCTCTCTGTCACCTCGCCGTACAACGCCGACTTTGACGGCGA 550881 Query 507760 CGAGATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCAT 507819 |||||||||| ||||||| || ||||| ||| | | || | ||| ||| ||| | Sbjct 550882 CGAGATGAACTTGCACGTCCCGCAGTCAGAGGAGACTCGGTCGGAGCTGATCAACATCGC 550941 Query 507820 GAGCGTGTCGCTCAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGG 507870 ||| ||| || | | ||||||||||||||||||||| |||| || Sbjct 550942 CGCCGTCGCGCGAAACATTATCTCGCCGCAGGCCAACAAGCCCGTCATGGG 550992 Score = 91.5 bits (100), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 507111 TCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACCG 507170 ||||||||||||||||| | | |||||||| | ||||||||||| ||| |||| | | Sbjct 550416 TCAAGGGCAAGGAGGGTCGTCTGCGCGGCAACTTGATGGGCAAGCGTGTCGACTTCTCGG 550475 Query 507171 CGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGCCCTATG 507230 | || ||||||||| ||| || | ||| | |||||||| |||||||| || Sbjct 550476 CTCGTACCGTCATCACGGGCGATCCAAACCTCGCTCTCGACGAGGTCGGCGTGCCGTACT 550535 Query 507231 AGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 507270 ||||| |||| | || | || |||||||| ||||| Sbjct 550536 CGATCGCACGGACGTTGACGTACCCTGAGCGCGTCACGCC 550575 >seq204 Length=181173 Score = 120 bits (132), Expect = 4e-21 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1254447 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAG 1254506 |||| ||| |||| |||||||||||||||||||| | || ||||| |||||| ||| Sbjct 39422 CCGACGCGCTCGAAGATGTCGTTGACAAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 39363 Query 1254507 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAG 1254557 |||||| ||||||||| ||||||||||| |||||||||||| |||| ||| Sbjct 39362 ATGCCCGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGATGTACGAGGAG 39312 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1254447 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAG 1254506 |||||||| || | ||||||||||| |||||||| | || ||||| |||||| ||| Sbjct 191 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 132 Query 1254507 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAG 1254557 || || ||||||||| |||||||| | ||||||||||||| |||||||| Sbjct 131 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 81 >seq200 Length=244404 Score = 114 bits (126), Expect = 2e-19 Identities = 180/255 (71%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 1574002 GCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCT-G 1574060 ||||| |||| ||||| ||||| |||||| ||| |||| | | ||||| | Sbjct 116860 GCGGCATCGATGTCGTCCGCAACCGAATCAAGACGTTCGCGCAGAAGAAGGT-GACCTTG 116918 Query 1574061 CCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCC 1574120 || | || ||||||||| | |||||||||||||| ||||||| | ||| | | || Sbjct 116919 CCTCTTGGCCGCCACAAGCTCATCATCCTCGACGAAGCCGACTCGATGACGACTGGCGCA 116978 Query 1574121 CAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCG 1574180 || || ||||| || ||| ||||| ||| |||||||||||| || || ||||| Sbjct 116979 CAACAAGCCCTCCGCCGCACGATGGAGCTCTACAGCAACACGACGCGGTTCGCGCTGGCT 117038 Query 1574181 TGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTT 1574240 |||||| |||| | | | |||||| | | |||||||| ||||| ||| |||| | | Sbjct 117039 TGCAACCAGTCGAACAAGATTATCGAGCCGATTCAAAGTCGGTGCGCGATTTTGCGGTAT 117098 Query 1574241 GTGCGCCTGGGTGAC 1574255 | | | ||| | ||| Sbjct 117099 GCGAGGCTGAGCGAC 117113 >seq182 Length=12385 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1254447 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAG 1254506 |||||||| || | ||||||||||| |||||||| | || ||||| |||||| ||| Sbjct 12193 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 12252 Query 1254507 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAG 1254557 || || ||||||||| |||||||| | ||||||||||||| |||||||| Sbjct 12253 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 12303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107121309899106