Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq196 244 2e-58 seq165 187 4e-41 seq175 145 1e-28 seq79 138 2e-26 seq212 131 3e-24 seq200 113 7e-19 seq204 105 1e-16 seq182 91.5 2e-12 >seq196 Length=101194 Score = 244 bits (270), Expect = 2e-58 Identities = 286/388 (74%), Gaps = 15/388 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||||||||||| ||| | |||||||||||||| | | |||||| || Sbjct 13437 CTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 13378 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||| ||||| || | ||| | || | ||||| | ||||| | | ||| Sbjct 13377 GTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCC 13318 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||||||| |||| ||||||||||||||||||| | || ||||| |||||||||||||| Sbjct 13317 GATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCCTC 13258 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| ||||||| | || |||||||||||| |||||| ||| |||||| Sbjct 13257 GATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGTGCC 13198 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| ||||||||||| |||| ||| ||| | || | | |||||| | ||| || Sbjct 13197 GGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTACGT 13138 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 ||| | |||| ||| | ||||| || | | ||||| ||||| Sbjct 13137 CTCGATCGCGCG---------GTCAATGTCGTCG------CCGTGGATGCCGACCGCGAC 13093 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCG 2073927 |||||||| ||||| ||| ||||||||| Sbjct 13092 GCGCATGAGCATGTGCTGCGGTCGCTCG 13065 Score = 168 bits (186), Expect = 1e-35 Identities = 257/372 (69%), Gaps = 0/372 (0%) Strand=Plus/Minus Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 |||| |||| ||||||| |||||| |||| |||||||||| ||| ||| || || Sbjct 13809 GTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGAC 13750 Query 2071701 GGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNN 2071760 ||| |||| | | | ||||| | | | | | ||||| |||| Sbjct 13749 GGCGTACCAGAGCTTCTGGGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTACTT 13690 Query 2071761 NNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGG 2071820 |||| | | || || |||||| | |||||| || ||||||||||||| ||| Sbjct 13689 TTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCCGG 13630 Query 2071821 GCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCA 2071880 ||| ||||| | |||||||||| | | || || ||| || |||||| |||| Sbjct 13629 GCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATCCA 13570 Query 2071881 CAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTC 2071940 ||| | | || | |||||||| ||| ||||||||||||||||||||| ||||| Sbjct 13569 AAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 13510 Query 2071941 GAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCG 2072000 ||| | |||| || |||||||||||||||||| |||||| ||| || |||||| ||| Sbjct 13509 GAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCG 13450 Query 2072001 CTTGCCGCCGCC 2072012 |||| ||| || Sbjct 13449 CTTGTTGCCTCC 13438 Score = 168 bits (186), Expect = 1e-35 Identities = 360/515 (70%), Gaps = 27/515 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| |||| ||||||| | |||||| |||||||| || ||||||||||| Sbjct 14982 TGGTCGACGGTGAACTTGATGGCGCCGACGGCAGCGCGGGTGCGGAGGTAGTACATGCCC 14923 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCG 2069368 |||||||| || ||| ||||| |||||||||||||| | || ||| ||| Sbjct 14922 GTCTTGAGACCTTTCTTCCATCCGTAGAAGTGCATCGACGTGA--GCTGCGCCATGGTCG 14865 Query 2069369 G-GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 | |||| | || || |||||||||||| |||||||| | | |||||||||| Sbjct 14864 GCGACGAGA-GGTGGACGTTGAGCGACTGCGACTGGTCGATGAACGCGCCGCGGTCGGCG 14806 Query 2069428 GCCATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486 || | ||||||| || | ||| || | |||||||||||||||| | | | |||||| Sbjct 14805 GCGAGGTCGATGACGAC-CTTTTGCGAGATCTCCCACACGGTCTTGTAGATGCGCTTGAG 14747 Query 2069487 ATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGA-GG 2069544 | || ||| | | | | | ||| | |||||| || || ||||||| | Sbjct 14746 CT-CGTCGG-----GGATGCCGGGGACGTTCTGGATCGAGCCGTTGTGC-GCGATGATCG 14694 Query 2069545 CGGTCGCGAAAGTCG-GGCG-TCCACAGGCCGCGCGCCATCATG-CGCTCGACCAGGTGG 2069601 | || | ||| | || ||||||||||||| | | | | ||| || || | Sbjct 14693 TGTTCTTCA---TCGCGTCGTTCCACAGGCCGCGGTCGACGAGGTCGC-GGAGGAGCCAG 14638 Query 2069602 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATG 2069661 ||||||| || || ||||| | ||| |||||||| |||||||||||| |||| Sbjct 14637 GGGTTGACGACCTGGAACTCGCCGGCGAGGACGCGGCGGGTGTAGATGTTGGACGTGTAC 14578 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC- 2069720 |||| |||||||| || ||| |||||||| |||| ||| || ||||| |||| Sbjct 14577 GGCTCGAACGCCTCGTTGAAGCCGAGGATCTGGCTGGTCGAGGCGGTAGGCATCGGCGCG 14518 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCA 2069755 ||| | ||||||||||| | ||||| ||| |||| Sbjct 14517 CAC-ACGAGCGAGTTGCGGATGCCGTGCTG-CGCA 14485 Score = 96.9 bits (106), Expect = 5e-14 Identities = 142/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGC-GCCGGCGCTCT 2070109 ||| || || ||||||||||| ||||| | ||||||| | ||||| | |||| | Sbjct 14305 CGCGGCGTGATAGATCGTCTCGAAGATCTGGACGTTGAGGTGGCGCGCTTCAGGCG-AGT 14247 Query 2070110 CCCACGGCAGGTCCA---TCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCA 2070166 | |||||||| | |||| || |||||||| || |||||||| |||| || | Sbjct 14246 CGAACGGCAGGCGGAGGGCCATG---AAGGCGTCGGCGAGACCCTGCACACCGATACCGA 14190 Query 2070167 TCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGA 2070226 |||| |||||||| | ||| | || |||||| || ||||||| ||||| ||||| Sbjct 14189 TCGGGCGGTGGCGGAAGTTGCTGCGCTCGGCCTCCTTGACGGGGTAGTAGTTGACGTCGA 14130 Query 2070227 TCACGCGGTTGAGGTTG 2070243 | | |||||| |||||| Sbjct 14129 TGATGCGGTTCAGGTTG 14113 >seq165 Length=391853 Score = 187 bits (206), Expect = 4e-41 Identities = 214/284 (75%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 |||||||||||||| | |||||||| |||||| | ||||||||| || | ||||| Sbjct 47716 TTGGTCTTGCCCTCCATCGAGATCATCTCCATGAAGTCGAACGGGTTCTCCTTGTGGTAG 47775 Query 793995 TGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 ||||||| || || | |||||| ||||||||| || || || |||||||||||| Sbjct 47776 ATCTTCTCGTTGCCAAGTGCGACAAGCAAGCGGTCGGCAACAAACTCGATGTACTGGCAC 47835 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 |||||| || |||||||||||||||| |||||||||| ||| ||| ||||||| | Sbjct 47836 ATGAGGTCGCTGTTCATGCCGATGAGCTTGACGGGCAGCGCCTCCGTGAGGAACTCTTGC 47895 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACGTC-GGACGACGGCTTGTCG-A 794172 ||||||||||| |||||| |||||| || | | ||| || || ||| | || Sbjct 47896 TCGATCTCGACCGCCTCGCGGATGATGCGCTCGACCGTGTCGGGGTGAGGGC--GGCGCT 47953 Query 794173 CGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| || | |||| ||||||||||||||| || |||||| Sbjct 47954 CGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGACCT 47997 Score = 105 bits (116), Expect = 1e-16 Identities = 118/157 (75%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 ||| |||||||| | |||||||||||||||||| ||||||| ||| ||| ||||| Sbjct 48127 GAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCGGAGAA 48186 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 |||||||||||||||||||| || ||||||| |||||| | || | | || || Sbjct 48187 GAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAA---GACGGAGCGGTC 48243 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTC 794532 | |||||| | | ||||||||| ||||| ||| Sbjct 48244 GTCCGAGATCCAGGTGAGCGCCCACTCGGCCTTCTTC 48280 >seq175 Length=283523 Score = 145 bits (160), Expect = 1e-28 Identities = 200/275 (73%), Gaps = 10/275 (4%) Strand=Plus/Minus Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 |||||||||||||| | |||||||| |||||| | ||||||||| | | ||| Sbjct 258701 TTGGTCTTGCCCTCCATCGAGATCATCTCCATAAAGTCGAACGGGTTCTCGGCATTGTAC 258642 Query 793995 TGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 |||||||| ||| |||| |||||| ||||| |||||||| || |||||||| | | Sbjct 258641 AGCTTCTCGTTCCCAAGCGCGACAAGCAATCGGTCCGCGACGAACTCGATGTACTGTCGC 258582 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 ||||||| |||||||||||||| | | ||||||| | || | | || || | | Sbjct 258581 ATGAGGGTCGCGTTCATGCCGATCAAGCCGACGGGCAAGGCGTCCGTCAGGAATTCCTGC 258522 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACGTCGGACGACG-GCTTGTCG-- 794171 |||||||||||||| ||| |||||| || || ||| ||| || | ||| |||| Sbjct 258521 TCGATCTCGACGGCTTCGGCGATGATTTG---GGCGACG-CGG-TGAGGCGCTGGTCGGC 258467 Query 794172 --ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 |||| || | |||| ||||||||||||||| Sbjct 258466 GCTCGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCG 258432 >seq79 Length=666268 Score = 138 bits (152), Expect = 2e-26 Identities = 218/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 429510 CTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAAC 429569 |||||| ||| |||| |||||||| ||||| ||||||| ||| | | ||| Sbjct 550703 CTCCAGTACGGCTGGATTGTCGAGCGACACCTCAAGGACGGCGACATCGTCCTGTTCAAC 550762 Query 429570 CGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGG- 429628 |||||||||||| | |||| | ||||||| | ||| || || |||||| Sbjct 550763 CGGCAGCCGTCGTTGCACAAGATGTCGATGATGGCGCACCGCGTCAAGCTCATGCCGTAC 550822 Query 429629 TCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGA 429688 ||| |||||||| |||||||| | || || | ||||||||||||||||||||||| Sbjct 550823 TCG-ACCTTCCGCCTCAACCTCTCTGTCACCTCGCCGTACAACGCCGACTTTGACGGCGA 550881 Query 429689 CGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCAT 429748 |||||||||| ||||||| || ||||| ||| | | || | || | | ||| | Sbjct 550882 CGAGATGAACTTGCACGTCCCGCAGTCAGAGGAGACTCGGTCGGAGCTGATCAACATCGC 550941 Query 429749 GGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGAT 429808 | ||| || | || | ||||||||||||||||||||| |||| || ||||| Sbjct 550942 CGCCGTCGCGCGAAACATTATCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATCGTGCA 551001 Query 429809 GGACGCCCTC 429818 |||| | ||| Sbjct 551002 GGACACGCTC 551011 Score = 105 bits (116), Expect = 1e-16 Identities = 217/315 (69%), Gaps = 16/315 (5%) Strand=Plus/Plus Query 434076 GTACTGGGCATCGAAGCGGCCGTCGCTGTGC-TCTTTTCCGAGAT---CAAGGCCGTGAT 434131 || || |||||||||||||| ||| || | || | |||| | ||| ||| || Sbjct 553509 GTGCTCGGCATCGAAGCGGCGCGCGC-GTCCGTCCTCCGCGAGTTGCGCAA---CGTCAT 553564 Query 434132 CTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTG 434191 | || |||||| || | |||||| |||||||||| || || |||||||| |||| Sbjct 553565 CGAGTTCGACGGCTCCAAGGTCAACTACCGCCACTTGTCGATGCTCACCGACATCATGAC 553624 Query 434192 CTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGGGCCGACCACGGCT- 434250 || |||||| || ||||| |||| || |||||| ||||||| ||||| ||||| | Sbjct 553625 GAACCGGGGCTCGCTGATGGCCATCACCCGCCACGGCATCAACCGTGCCGA-CACGGGTG 553683 Query 434251 TTCTGTCGCGGGCCTCCTTTGAGGAGACTGTCGACATCCTCTTTGACGCGGCGGCCTTTG 434310 || ||| ||| || |||||||| || || ||||| | || |||||||| | Sbjct 553684 CGCTCATGCGCTGCTCGTTCGAGGAGACGGTGGAGATCCTGATGGAGGCGGCGGCGGCGG 553743 Query 434311 CCGAGACCGACAAGATCACCGACGGATCGGTCACCGAGCCCATCATTCTAGGCCAGGCGG 434370 ||||| ||| | | |||| | ||| ||||| | || | || |||||| | Sbjct 553744 GAGAGACGGACTACTGC----ACGGGT--GTCGCCGAGGCAGTCTTGCTCGGCCAGCAGC 553797 Query 434371 CGCCCATCGGCACGG 434385 |||| || ||||||| Sbjct 553798 CGCCGATGGGCACGG 553812 Score = 95.1 bits (104), Expect = 2e-13 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 429067 TCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACGG 429126 |||||||||||||||| || | |||||||| | ||||||||||| ||| |||| ||| Sbjct 550416 TCAAGGGCAAGGAGGGTCGTCTGCGCGGCAACTTGATGGGCAAGCGTGTCGACTTCTCGG 550475 Query 429127 CGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGTGCCCTATG 429186 | || ||||||||| ||| || | ||| | |||||||| |||||||| || Sbjct 550476 CTCGTACCGTCATCACGGGCGATCCAAACCTCGCTCTCGACGAGGTCGGCGTGCCGTACT 550535 Query 429187 AGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226 ||||| |||| | || | || |||||||| ||||| Sbjct 550536 CGATCGCACGGACGTTGACGTACCCTGAGCGCGTCACGCC 550575 >seq212 Length=170411 Score = 131 bits (144), Expect = 3e-24 Identities = 273/400 (68%), Gaps = 15/400 (4%) Strand=Plus/Minus Query 652878 AGCCCTTTACGCACGTCGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCA 652937 || ||| |||||| |||| | ||||| | || || ||| |||||| ||||||| Sbjct 60763 AGACCTGGACGCACTGCGAGATCCACCCTTCCATGATCCTCGGCATCTGCGCGTCCATCA 60704 Query 652938 TCCCCTTTTCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGC 652997 ||||||| || ||||||||||| | |||||||||| ||||||| | ||||||||||||| Sbjct 60703 TCCCCTTCCCCGACCACAACCAGTCCCCGCGCAACACCTACCAGTCTGCCATGGGCAAGC 60644 Query 652998 AGAGCAAGGCCGTCGTGTCGCTCAACGCCGATCA---CGCCATCGACACCGTGTCGCACG 653054 || || | | | || | |||| | | | || | ||| ||||| || | || Sbjct 60643 AG-GCTATG--GGTGTCTACCTCACCAACTACCAGGTCCGCATGGACACGATGGCCAACA 60587 Query 653055 CCCTCTGCTACCCGCAGGTGCCGCTGGTGCAGACG---GCCATGGAGGACGTCATCGGCG 653111 ||||| ||||||||| ||| || | | |||| | |||||| || || | Sbjct 60586 TCCTCTACTACCCGCAAAAGCCCCTCGCGACGACGCGCTCGATGGAGTACCTC--CACTT 60529 Query 653112 CCACGCGCCTCCCGATGGGCCAGAATGCGCGCGTGGCCATCATGAGCGACCC---CTACA 653168 || || || |||| || ||||| || ||| |||||| || || || | ||||| Sbjct 60528 CCGCGAGCTGCCCG-CCGGACAGAACGCCATCGTCGCCATCCTGTGCTACTCCGGCTACA 60470 Query 653169 ACCAGGAGGACTCGCTCGTGCTCAAGCAGGACTTTGTCGACCGCGGCGGCTTCCGCTCGA 653228 |||||||||| ||| || | | || ||| || ||||||||||| ||||||||| Sbjct 60469 ACCAGGAGGATTCGGTCATCATGAACCAGTCCTCGATCGACCGCGGCCTGTTCCGCTCGC 60410 Query 653229 TGATCAAGCGCACCTACCGCGACGACGAAAAGACGCGCGG 653268 | | | || ||||| ||| | || |||| | |||| Sbjct 60409 TCTACTACCGGTCCTACATGGACCAGGAGAAGAAGAGCGG 60370 Score = 116 bits (128), Expect = 6e-20 Identities = 348/526 (66%), Gaps = 23/526 (4%) Strand=Plus/Minus Query 653618 GTCAAGATCGTCACCCGCGCCATGCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGC 653677 |||||||| || |||| | | || ||| ||| | || ||||| | | || ||| Sbjct 60080 GTCAAGATTCGCATCCGCTCGACTCGTGTGCCAGAGATTGGTGACAAGTTCGCCTCTCGC 60021 Query 653678 CACGGGCAAAAGGGCACCGTGGGCAG--CGTGCGCTCGACCGAGGAAATGCCGTGGTCGC 653735 ||||| || ||||| || | |||| | | | | | || ||||| ||||||| || | Sbjct 60020 CACGGTCAGAAGGGTACGATCGGCATTACCTAC-CGCCAC-GAGGACATGCCGT--TCTC 59965 Query 653736 CGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGA 653795 ||| || ||| |||||||||| | |||||||||| ||||||||||| || ||||||| Sbjct 59964 CGC-CGAGGGGATCACGCCCGACCTGATCATCAACCCTCACGCCATCCCCTCCCGCATGA 59906 Query 653796 CCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGG 653855 |||| ||| | || | ||| || ||| ||||||| | | ||| ||| | Sbjct 59905 CCATCGGCCACTTGGTCGAGTGTCTGCTGTCCAAGGTGTCGACAATCACCGGCAACGAAG 59846 Query 653856 GCGACGGCACCCCGTTTGGCGGCGTCACCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCC 653915 |||||| || ||||| || ||||| || | || |||| Sbjct 59845 GCGACGCAACGCCGTTCTCCGAGGTCACGGTCGAGGCCATCTCGG---AACTGCTCCGCA 59789 Query 653916 A---CGGGTGCGAG-CGCTACGGCAAGGAGGTGCTCTACCACCCGCACACGGG-CG--AG 653968 | ||| | | | ||| |||| ||||| | ||| || ||||| || || || Sbjct 59788 AGTACGGCTACCACTCGCG-CGGCCTCGAGGTCATGTACAACGGCCACACCGGTCGTAAG 59730 Query 653969 CCCATGGAGGCGTTGATCTTT-TCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGC 654027 | | ||||| | ||| ||||| ||| |||||||||| ||| ||| ||| Sbjct 59729 CTCC---AGGCGCAGGTCTACCTCGGC-CCGACCTACTACCAGCGCCTCAAGCACATGGT 59674 Query 654028 CATCGACAAGATCCACGCCCGGCCGCGCGGCCCCGTGCAGATGCTCACCAAGCAGCCGGT 654087 | ||| |||||||| || || |||||||||| |||||||| || ||| ||||| || Sbjct 59673 CGGCGATAAGATCCATGCTCGCGCGCGCGGCCCTGTGCAGATCCTGACCCGCCAGCCCGT 59614 Query 654088 CGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 |||||| || ||| | || ||||| || |||||||||||||| Sbjct 59613 CGAGGGTCGTTCGAGGGACGGTGGCTTGCGGTTCGGAGAGATGGAG 59568 >seq200 Length=244404 Score = 113 bits (124), Expect = 7e-19 Identities = 147/202 (73%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 2019192 GACCT-GCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTC 2019250 ||||| ||| | |||||||||||| | ||||||||||| || ||||||| | ||| | Sbjct 116912 GACCTTGCCTCTTGGCCGCCACAAGCTCATCATCCTCGACGAAGCCGACTCGATGACGAC 116971 Query 2019251 GGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGC 2019310 | || || || |||||||| || ||||| |||| ||||||||||||||| || Sbjct 116972 TGGCGCACAACAAGCCCTCCGCCGCACGATGGAGCTCTACAGCAACACGACGCGGTTCGC 117031 Query 2019311 GCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTT 2019370 |||||| |||||| |||| | | | ||||| | | || || || ||||| || || Sbjct 117032 GCTGGCTTGCAACCAGTCGAACAAGATTATCGAGCCGATTCAAAGTCGGTGCGCGATTTT 117091 Query 2019371 GCGCTTTGCGCGCCTCACCGAC 2019392 ||| | |||| | || | |||| Sbjct 117092 GCGGTATGCGAGGCTGAGCGAC 117113 >seq204 Length=181173 Score = 105 bits (116), Expect = 1e-16 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||| ||| |||| |||||||||||||||||||| | ||| ||||| ||||| ||| Sbjct 39422 CCGACGCGCTCGAAGATGTCGTTGACAAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 39363 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 |||||| ||||||||| ||||||||||| |||||||| Sbjct 39362 ATGCCCGTGTCGGGGTGGACCTGCTTGAGGACCTTGTA 39325 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| |||||||||||||| |||| ||||||| | | || |||||| | | || Sbjct 399 ACTTGGTGACAGCCTTGGTACCCTCAGAGATGGCGTGCTTCGAGAGCTCGCCGGGGAGGA 340 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 339 TGAGGCGGACGGAGGTTTGGATCTCGCG 312 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||||||||| ||||| |||| ||||||| | | || |||||| | | || Sbjct 2571 ACTTGGTGACGGCCTTGGTGCCCTCCGAGATGGCGTGCTTCGAGAGCTCGCCGGGAAGGA 2630 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 2631 TGAGGCGGACGGAGGTTTGGATCTCGCG 2658 Score = 89.7 bits (98), Expect = 8e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 ||| ||||||||||| || ||||| |||| ||||||| | | || |||||| | | ||| Sbjct 39628 CTTCGTGACGGCCTTCGTGCCCTCCGAGATGGCGTGCTTCGAAAGCTCGCCGGGGAGGAT 39569 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||| ||||| |||||||||||||||| Sbjct 39568 GAGGCGGACGGCCGTCTGGATCTCGCGGG 39540 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||||||| || | ||||||||||| |||||||| | ||| ||||| ||||| ||| Sbjct 191 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 132 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAG 1485723 || || ||||||||| |||||||| | ||||||||| | | |||||| Sbjct 131 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 81 >seq182 Length=12385 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||| ||||||||||| |||| ||||||| | | || |||||| | | || Sbjct 11984 ACTTGGTGACGGCTTTGGTACCCTCAGAGATGGCGTGCTTCGAGAGCTCGCCGGGGAGGA 12043 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 12044 TGAGGCGGACGGAGGTTTGGATCTCGCG 12071 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||||||| || | ||||||||||| |||||||| | ||| ||||| ||||| ||| Sbjct 12193 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 12252 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAG 1485723 || || ||||||||| |||||||| | ||||||||| | | |||||| Sbjct 12253 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 12303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916223210345702