Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F000988875.1_202015-05- 06] 218 sequences; 20,361,044 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq196 136 4e-27 >seq196 Length=101194 Score = 136 bits (150), Expect = 4e-27 Identities = 303/444 (68%), Gaps = 13/444 (3%) Strand=Plus/Minus Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 |||||||||||||||| || || | ||||| ||| | ||| || ||||| || | Sbjct 13498 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTC 13439 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 |||||||||| | |||| || ||||||| ||||||| | |||||| | |||| ||| Sbjct 13438 CCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 13379 Query 148001 CAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059 ||| |||||| ||| ||| | ||| || || | | ||| | | | Sbjct 13378 -AGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGG 13320 Query 148060 CCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATG 148116 || |||||||| ||||| ||| || ||| ||||| || | | || ||||||| Sbjct 13319 CCGATGCCGCCTGCCGT-CTTGGAGATGAGCGCGCA--CGTCTTGAGCGTGTCGTAGATG 13263 Query 148117 CCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175 || ||||| ||||| || | || | | | || ||||| | | ||||| | | Sbjct 13262 CCCTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCACGACGAGAGCTGCGGGTGCGG 13204 Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235 ||| || || ||| || || || |||||||||||| | | ||| | | Sbjct 13203 CGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTT 13144 Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295 |||||||| || ||| || |||||||||||||| ||||| | ||||||||||||||| Sbjct 13143 GTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 13084 Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319 ||||||||| ||||| ||||| || Sbjct 13083 CATGTGCTGCGGTCGCTCGGCCAC 13060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609901234480