Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07- 26] 30 sequences; 20,810,536 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq14 114 2e-20 >seq14 Length=779201 Score = 114 bits (126), Expect = 2e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 |||| ||||| || |||| ||| || |||| |||| || || | | |||||| Sbjct 242741 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 242800 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188 | || ||| |||||| |||||||||||||||||||| || | | ||| | || |||| Sbjct 242801 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 242860 Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248 ||||| | ||| || |||||| | |||||| || | || || | | ||||||| | || Sbjct 242861 CCGTGCATCCCTCGACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGCT 242920 Query 146249 TGGTGGTCAGCAGGGGGA 146266 |||| ||||| || |||| Sbjct 242921 TGGTCGTCAGGAGCGGGA 242938 Score = 104 bits (114), Expect = 3e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| || ||||| ||||||| |||||||||||||||||| || || | || Sbjct 242187 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGCTGGAGG 242246 Query 145732 ATGAAGTCCCC-GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 ||||| || ||| ||| | | | || | | |||| ||||| |||| || | || Sbjct 242247 ATGAACTCGTGTGGGATCGTGTCG-GAGACGAGAGCGATCATGTGCGTCAAGAGCGCATA 242305 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| |||||||||||||| || || || | ||| | ||||||||||||| |||| Sbjct 242306 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTACATGAGGCA 242365 Query 145851 GGAGAG 145856 |||||| Sbjct 242366 GGAGAG 242371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076578721200