Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07-
26] 30 sequences; 20,810,536 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq15 91.5 2e-13
seq5 91.5 2e-13
>seq15
Length=702288
Score = 91.5 bits (100), Expect = 2e-13
Identities = 117/161 (73%), Gaps = 3/161 (2%)
Strand=Plus/Minus
Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689
|| ||||| | |||||||| | |||||||||||||||||| || || || ||||| ||
Sbjct 258329 GAGAACGTCAAGCCGGGCATCAAGCCACGCTTTTTAAGCCAGAAGATCGAGGCGAACGAG 258270
Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749
||||| |||||||| || || ||||| || || || | |||| || || | |||||
Sbjct 258269 CCGGAGAAGAAGATGCCCTCGACTGCGGCGAAAGCGACCAGTCGTTCCGCAAACACGGCG 258210
Query 33750 C---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
| ||| ||||| | ||||| |||||||||||
Sbjct 258209 CGAGGGTCCGAGATCCATCGCAGCGCCCACTCGGCCTTCTT 258169
>seq5
Length=1666694
Score = 91.5 bits (100), Expect = 2e-13
Identities = 117/161 (73%), Gaps = 3/161 (2%)
Strand=Plus/Plus
Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689
|| || |||||||||||||| | ||| ||||| || ||||| || ||||| ||||| ||
Sbjct 1125372 GAGAAGGTGAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAG 1125431
Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749
||||| |||||||| || || || || || || || | || | ||| || | ||| |
Sbjct 1125432 CCGGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAAGACGGAG 1125491
Query 33750 CTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
| ||| | ||||| | | ||||| |||||||||||
Sbjct 1125492 CGGTCGTCCGAGATCCAGGTGAGCGCCCACTCGGCCTTCTT 1125532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817363818400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |