Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07-
26] 30 sequences; 20,810,536 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq15 114 2e-20
>seq15
Length=702288
Score = 114 bits (126), Expect = 2e-20
Identities = 351/536 (65%), Gaps = 14/536 (3%)
Strand=Plus/Minus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
|| || | ||| ||||| || || |||||||| || | || | || | | | |
Sbjct 566085 ACACGCTCCATGAAGAGGTCGGGGATCCAAAGGGCAAAGAACAAGTCGCGCGCGCGGACC 566026
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| || || ||||| || ||||||||| | | || || | ||||||||
Sbjct 566025 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGC 565966
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|| | ||| ||||| | | ||||| || ||||| |||||||| || | ||| | ||
Sbjct 565965 TCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCC 565906
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
||||| || || || | | ||| || || || || || || || || || |||| |
Sbjct 565905 GTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCG 565846
Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321
|| || || | || || || ||| || || || || || || |||||| | ||
Sbjct 565845 ATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTG 565786
Query 72322 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
||||| | ||||| ||| || | ||| || ||||||||||| || || ||| ||||
Sbjct 565785 GAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCAT 565727
Query 72381 -GTTAAGTAGAA-AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438
|| | | ||| || | ||| | || || | || || || || || | ||
Sbjct 565726 CGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGC--GTGCCGGCGTTGAAGAGCGTC 565669
Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498
|| || ||||||||||| | || |||| || ||||||||||| || || ||
Sbjct 565668 GGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCA 565609
Query 72499 ATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550
|| || || | |||| || |||||||| ||||| | ||| ||||| ||||
Sbjct 565608 ATGTCGTCGCCGTGGATG----CCGACCGCGACGCGCATGAGCATGTGCTGCGGTC 565557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138948322800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |