Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07- 26] 30 sequences; 20,810,536 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq15 244 2e-58 seq5 187 4e-41 seq6 138 2e-26 seq3 105 1e-16 seq2 91.5 2e-12 >seq15 Length=702288 Score = 244 bits (270), Expect = 2e-58 Identities = 286/388 (74%), Gaps = 15/388 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||||||||||| ||| | |||||||||||||| | | |||||| || Sbjct 565924 CTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 565865 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||| ||||| || | ||| | || | ||||| | ||||| | | ||| Sbjct 565864 GTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCC 565805 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||||||| |||| ||||||||||||||||||| | || ||||| |||||||||||||| Sbjct 565804 GATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCCTC 565745 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| ||||||| | || |||||||||||| |||||| ||| |||||| Sbjct 565744 GATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGTGCC 565685 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| ||||||||||| |||| ||| ||| | || | | |||||| | ||| || Sbjct 565684 GGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTACGT 565625 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 ||| | |||| ||| | ||||| || | | ||||| ||||| Sbjct 565624 CTCGATCGCGCG---------GTCAATGTCGTCG------CCGTGGATGCCGACCGCGAC 565580 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCG 2073927 |||||||| ||||| ||| ||||||||| Sbjct 565579 GCGCATGAGCATGTGCTGCGGTCGCTCG 565552 Score = 168 bits (186), Expect = 1e-35 Identities = 257/372 (69%), Gaps = 0/372 (0%) Strand=Plus/Minus Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 |||| |||| ||||||| |||||| |||| |||||||||| ||| ||| || || Sbjct 566296 GTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGAC 566237 Query 2071701 GGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNN 2071760 ||| |||| | | | ||||| | | | | | ||||| |||| Sbjct 566236 GGCGTACCAGAGCTTCTGGGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTACTT 566177 Query 2071761 NNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGG 2071820 |||| | | || || |||||| | |||||| || ||||||||||||| ||| Sbjct 566176 TTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCCGG 566117 Query 2071821 GCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCA 2071880 ||| ||||| | |||||||||| | | || || ||| || |||||| |||| Sbjct 566116 GCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATCCA 566057 Query 2071881 CAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTC 2071940 ||| | | || | |||||||| ||| ||||||||||||||||||||| ||||| Sbjct 566056 AAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 565997 Query 2071941 GAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCG 2072000 ||| | |||| || |||||||||||||||||| |||||| ||| || |||||| ||| Sbjct 565996 GAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCG 565937 Query 2072001 CTTGCCGCCGCC 2072012 |||| ||| || Sbjct 565936 CTTGTTGCCTCC 565925 Score = 168 bits (186), Expect = 1e-35 Identities = 360/515 (70%), Gaps = 27/515 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| |||| ||||||| | |||||| |||||||| || ||||||||||| Sbjct 567469 TGGTCGACGGTGAACTTGATGGCGCCGACGGCAGCGCGGGTGCGGAGGTAGTACATGCCC 567410 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCG 2069368 |||||||| || ||| ||||| |||||||||||||| | || ||| ||| Sbjct 567409 GTCTTGAGACCTTTCTTCCATCCGTAGAAGTGCATCGACGTGA--GCTGCGCCATGGTCG 567352 Query 2069369 G-GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 | |||| | || || |||||||||||| |||||||| | | |||||||||| Sbjct 567351 GCGACGAGA-GGTGGACGTTGAGCGACTGCGACTGGTCGATGAACGCGCCGCGGTCGGCG 567293 Query 2069428 GCCATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486 || | ||||||| || | ||| || | |||||||||||||||| | | | |||||| Sbjct 567292 GCGAGGTCGATGACGAC-CTTTTGCGAGATCTCCCACACGGTCTTGTAGATGCGCTTGAG 567234 Query 2069487 ATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGA-GG 2069544 | || ||| | | | | | ||| | |||||| || || ||||||| | Sbjct 567233 CT-CGTCGG-----GGATGCCGGGGACGTTCTGGATCGAGCCGTTGTGC-GCGATGATCG 567181 Query 2069545 CGGTCGCGAAAGTCG-GGCG-TCCACAGGCCGCGCGCCATCATG-CGCTCGACCAGGTGG 2069601 | || | ||| | || ||||||||||||| | | | | ||| || || | Sbjct 567180 TGTTCTTCA---TCGCGTCGTTCCACAGGCCGCGGTCGACGAGGTCGC-GGAGGAGCCAG 567125 Query 2069602 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATG 2069661 ||||||| || || ||||| | ||| |||||||| |||||||||||| |||| Sbjct 567124 GGGTTGACGACCTGGAACTCGCCGGCGAGGACGCGGCGGGTGTAGATGTTGGACGTGTAC 567065 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC- 2069720 |||| |||||||| || ||| |||||||| |||| ||| || ||||| |||| Sbjct 567064 GGCTCGAACGCCTCGTTGAAGCCGAGGATCTGGCTGGTCGAGGCGGTAGGCATCGGCGCG 567005 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCA 2069755 ||| | ||||||||||| | ||||| ||| |||| Sbjct 567004 CAC-ACGAGCGAGTTGCGGATGCCGTGCTG-CGCA 566972 Score = 145 bits (160), Expect = 1e-28 Identities = 200/275 (73%), Gaps = 10/275 (4%) Strand=Plus/Minus Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 |||||||||||||| | |||||||| |||||| | ||||||||| | | ||| Sbjct 258693 TTGGTCTTGCCCTCCATCGAGATCATCTCCATAAAGTCGAACGGGTTCTCGGCATTGTAC 258634 Query 793995 TGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 |||||||| ||| |||| |||||| ||||| |||||||| || |||||||| | | Sbjct 258633 AGCTTCTCGTTCCCAAGCGCGACAAGCAATCGGTCCGCGACGAACTCGATGTACTGTCGC 258574 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 ||||||| |||||||||||||| | | ||||||| | || | | || || | | Sbjct 258573 ATGAGGGTCGCGTTCATGCCGATCAAGCCGACGGGCAAGGCGTCCGTCAGGAATTCCTGC 258514 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACGTCGGACGACG-GCTTGTCG-- 794171 |||||||||||||| ||| |||||| || || ||| ||| || | ||| |||| Sbjct 258513 TCGATCTCGACGGCTTCGGCGATGATTTG---GGCGACG-CGG-TGAGGCGCTGGTCGGC 258459 Query 794172 --ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 |||| || | |||| ||||||||||||||| Sbjct 258458 GCTCGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCG 258424 Score = 96.9 bits (106), Expect = 5e-14 Identities = 142/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGC-GCCGGCGCTCT 2070109 ||| || || ||||||||||| ||||| | ||||||| | ||||| | |||| | Sbjct 566792 CGCGGCGTGATAGATCGTCTCGAAGATCTGGACGTTGAGGTGGCGCGCTTCAGGCG-AGT 566734 Query 2070110 CCCACGGCAGGTCCA---TCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCA 2070166 | |||||||| | |||| || |||||||| || |||||||| |||| || | Sbjct 566733 CGAACGGCAGGCGGAGGGCCATG---AAGGCGTCGGCGAGACCCTGCACACCGATACCGA 566677 Query 2070167 TCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGA 2070226 |||| |||||||| | ||| | || |||||| || ||||||| ||||| ||||| Sbjct 566676 TCGGGCGGTGGCGGAAGTTGCTGCGCTCGGCCTCCTTGACGGGGTAGTAGTTGACGTCGA 566617 Query 2070227 TCACGCGGTTGAGGTTG 2070243 | | |||||| |||||| Sbjct 566616 TGATGCGGTTCAGGTTG 566600 >seq5 Length=1666694 Score = 187 bits (206), Expect = 4e-41 Identities = 214/284 (75%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 793935 TTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG 793994 |||||||||||||| | |||||||| |||||| | ||||||||| || | ||||| Sbjct 1124969 TTGGTCTTGCCCTCCATCGAGATCATCTCCATGAAGTCGAACGGGTTCTCCTTGTGGTAG 1125028 Query 793995 TGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 ||||||| || || | |||||| ||||||||| || || || |||||||||||| Sbjct 1125029 ATCTTCTCGTTGCCAAGTGCGACAAGCAAGCGGTCGGCAACAAACTCGATGTACTGGCAC 1125088 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 |||||| || |||||||||||||||| |||||||||| ||| ||| ||||||| | Sbjct 1125089 ATGAGGTCGCTGTTCATGCCGATGAGCTTGACGGGCAGCGCCTCCGTGAGGAACTCTTGC 1125148 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACGTC-GGACGACGGCTTGTCG-A 794172 ||||||||||| |||||| |||||| || | | ||| || || ||| | || Sbjct 1125149 TCGATCTCGACCGCCTCGCGGATGATGCGCTCGACCGTGTCGGGGTGAGGGC--GGCGCT 1125206 Query 794173 CGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||| || | |||| ||||||||||||||| || |||||| Sbjct 1125207 CGAGGTGCGAGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGACCT 1125250 Score = 131 bits (144), Expect = 3e-24 Identities = 273/400 (68%), Gaps = 15/400 (4%) Strand=Plus/Plus Query 652878 AGCCCTTTACGCACGTCGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCA 652937 || ||| |||||| |||| | ||||| | || || ||| |||||| ||||||| Sbjct 1605923 AGACCTGGACGCACTGCGAGATCCACCCTTCCATGATCCTCGGCATCTGCGCGTCCATCA 1605982 Query 652938 TCCCCTTTTCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGC 652997 ||||||| || ||||||||||| | |||||||||| ||||||| | ||||||||||||| Sbjct 1605983 TCCCCTTCCCCGACCACAACCAGTCCCCGCGCAACACCTACCAGTCTGCCATGGGCAAGC 1606042 Query 652998 AGAGCAAGGCCGTCGTGTCGCTCAACGCCGATCA---CGCCATCGACACCGTGTCGCACG 653054 || || | | | || | |||| | | | || | ||| ||||| || | || Sbjct 1606043 AG-GCTATG--GGTGTCTACCTCACCAACTACCAGGTCCGCATGGACACGATGGCCAACA 1606099 Query 653055 CCCTCTGCTACCCGCAGGTGCCGCTGGTGCAGACG---GCCATGGAGGACGTCATCGGCG 653111 ||||| ||||||||| ||| || | | |||| | |||||| || || | Sbjct 1606100 TCCTCTACTACCCGCAAAAGCCCCTCGCGACGACGCGCTCGATGGAGTACCTC--CACTT 1606157 Query 653112 CCACGCGCCTCCCGATGGGCCAGAATGCGCGCGTGGCCATCATGAGCGACCC---CTACA 653168 || || || |||| || ||||| || ||| |||||| || || || | ||||| Sbjct 1606158 CCGCGAGCTGCCCG-CCGGACAGAACGCCATCGTCGCCATCCTGTGCTACTCCGGCTACA 1606216 Query 653169 ACCAGGAGGACTCGCTCGTGCTCAAGCAGGACTTTGTCGACCGCGGCGGCTTCCGCTCGA 653228 |||||||||| ||| || | | || ||| || ||||||||||| ||||||||| Sbjct 1606217 ACCAGGAGGATTCGGTCATCATGAACCAGTCCTCGATCGACCGCGGCCTGTTCCGCTCGC 1606276 Query 653229 TGATCAAGCGCACCTACCGCGACGACGAAAAGACGCGCGG 653268 | | | || ||||| ||| | || |||| | |||| Sbjct 1606277 TCTACTACCGGTCCTACATGGACCAGGAGAAGAAGAGCGG 1606316 Score = 116 bits (128), Expect = 6e-20 Identities = 348/526 (66%), Gaps = 23/526 (4%) Strand=Plus/Plus Query 653618 GTCAAGATCGTCACCCGCGCCATGCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGC 653677 |||||||| || |||| | | || ||| ||| | || ||||| | | || ||| Sbjct 1606606 GTCAAGATTCGCATCCGCTCGACTCGTGTGCCAGAGATTGGTGACAAGTTCGCCTCTCGC 1606665 Query 653678 CACGGGCAAAAGGGCACCGTGGGCAG--CGTGCGCTCGACCGAGGAAATGCCGTGGTCGC 653735 ||||| || ||||| || | |||| | | | | | || ||||| ||||||| || | Sbjct 1606666 CACGGTCAGAAGGGTACGATCGGCATTACCTAC-CGCCAC-GAGGACATGCCGT--TCTC 1606721 Query 653736 CGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGA 653795 ||| || ||| |||||||||| | |||||||||| ||||||||||| || ||||||| Sbjct 1606722 CGC-CGAGGGGATCACGCCCGACCTGATCATCAACCCTCACGCCATCCCCTCCCGCATGA 1606780 Query 653796 CCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGG 653855 |||| ||| | || | ||| || ||| ||||||| | | ||| ||| | Sbjct 1606781 CCATCGGCCACTTGGTCGAGTGTCTGCTGTCCAAGGTGTCGACAATCACCGGCAACGAAG 1606840 Query 653856 GCGACGGCACCCCGTTTGGCGGCGTCACCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCC 653915 |||||| || ||||| || ||||| || | || |||| Sbjct 1606841 GCGACGCAACGCCGTTCTCCGAGGTCACGGTCGAGGCCATCTCGG---AACTGCTCCGCA 1606897 Query 653916 A---CGGGTGCGAG-CGCTACGGCAAGGAGGTGCTCTACCACCCGCACACGGG-CG--AG 653968 | ||| | | | ||| |||| ||||| | ||| || ||||| || || || Sbjct 1606898 AGTACGGCTACCACTCGCG-CGGCCTCGAGGTCATGTACAACGGCCACACCGGTCGTAAG 1606956 Query 653969 CCCATGGAGGCGTTGATCTTT-TCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGC 654027 | | ||||| | ||| ||||| ||| |||||||||| ||| ||| ||| Sbjct 1606957 CTCC---AGGCGCAGGTCTACCTCGGC-CCGACCTACTACCAGCGCCTCAAGCACATGGT 1607012 Query 654028 CATCGACAAGATCCACGCCCGGCCGCGCGGCCCCGTGCAGATGCTCACCAAGCAGCCGGT 654087 | ||| |||||||| || || |||||||||| |||||||| || ||| ||||| || Sbjct 1607013 CGGCGATAAGATCCATGCTCGCGCGCGCGGCCCTGTGCAGATCCTGACCCGCCAGCCCGT 1607072 Query 654088 CGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 |||||| || ||| | || ||||| || |||||||||||||| Sbjct 1607073 CGAGGGTCGTTCGAGGGACGGTGGCTTGCGGTTCGGAGAGATGGAG 1607118 Score = 113 bits (124), Expect = 7e-19 Identities = 147/202 (73%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 2019192 GACCT-GCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTC 2019250 ||||| ||| | |||||||||||| | ||||||||||| || ||||||| | ||| | Sbjct 950385 GACCTTGCCTCTTGGCCGCCACAAGCTCATCATCCTCGACGAAGCCGACTCGATGACGAC 950326 Query 2019251 GGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGC 2019310 | || || || |||||||| || ||||| |||| ||||||||||||||| || Sbjct 950325 TGGCGCACAACAAGCCCTCCGCCGCACGATGGAGCTCTACAGCAACACGACGCGGTTCGC 950266 Query 2019311 GCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTT 2019370 |||||| |||||| |||| | | | ||||| | | || || || ||||| || || Sbjct 950265 GCTGGCTTGCAACCAGTCGAACAAGATTATCGAGCCGATTCAAAGTCGGTGCGCGATTTT 950206 Query 2019371 GCGCTTTGCGCGCCTCACCGAC 2019392 ||| | |||| | || | |||| Sbjct 950205 GCGGTATGCGAGGCTGAGCGAC 950184 Score = 105 bits (116), Expect = 1e-16 Identities = 118/157 (75%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 ||| |||||||| | |||||||||||||||||| ||||||| ||| ||| ||||| Sbjct 1125380 GAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCGGAGAA 1125439 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 |||||||||||||||||||| || ||||||| |||||| | || | | || || Sbjct 1125440 GAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAA---GACGGAGCGGTC 1125496 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTC 794532 | |||||| | | ||||||||| ||||| ||| Sbjct 1125497 GTCCGAGATCCAGGTGAGCGCCCACTCGGCCTTCTTC 1125533 >seq6 Length=1546759 Score = 138 bits (152), Expect = 2e-26 Identities = 218/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 429510 CTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAAC 429569 |||||| ||| |||| |||||||| ||||| ||||||| ||| | | ||| Sbjct 256538 CTCCAGTACGGCTGGATTGTCGAGCGACACCTCAAGGACGGCGACATCGTCCTGTTCAAC 256479 Query 429570 CGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGG- 429628 |||||||||||| | |||| | ||||||| | ||| || || |||||| Sbjct 256478 CGGCAGCCGTCGTTGCACAAGATGTCGATGATGGCGCACCGCGTCAAGCTCATGCCGTAC 256419 Query 429629 TCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGA 429688 ||| |||||||| |||||||| | || || | ||||||||||||||||||||||| Sbjct 256418 TCG-ACCTTCCGCCTCAACCTCTCTGTCACCTCGCCGTACAACGCCGACTTTGACGGCGA 256360 Query 429689 CGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACACCAT 429748 |||||||||| ||||||| || ||||| ||| | | || | || | | ||| | Sbjct 256359 CGAGATGAACTTGCACGTCCCGCAGTCAGAGGAGACTCGGTCGGAGCTGATCAACATCGC 256300 Query 429749 GGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGAT 429808 | ||| || | || | ||||||||||||||||||||| |||| || ||||| Sbjct 256299 CGCCGTCGCGCGAAACATTATCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATCGTGCA 256240 Query 429809 GGACGCCCTC 429818 |||| | ||| Sbjct 256239 GGACACGCTC 256230 Score = 105 bits (116), Expect = 1e-16 Identities = 217/315 (69%), Gaps = 16/315 (5%) Strand=Plus/Minus Query 434076 GTACTGGGCATCGAAGCGGCCGTCGCTGTGC-TCTTTTCCGAGAT---CAAGGCCGTGAT 434131 || || |||||||||||||| ||| || | || | |||| | ||| ||| || Sbjct 253732 GTGCTCGGCATCGAAGCGGCGCGCGC-GTCCGTCCTCCGCGAGTTGCGCAA---CGTCAT 253677 Query 434132 CTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACACCATGTG 434191 | || |||||| || | |||||| |||||||||| || || |||||||| |||| Sbjct 253676 CGAGTTCGACGGCTCCAAGGTCAACTACCGCCACTTGTCGATGCTCACCGACATCATGAC 253617 Query 434192 CTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGGGCCGACCACGGCT- 434250 || |||||| || ||||| |||| || |||||| ||||||| ||||| ||||| | Sbjct 253616 GAACCGGGGCTCGCTGATGGCCATCACCCGCCACGGCATCAACCGTGCCGA-CACGGGTG 253558 Query 434251 TTCTGTCGCGGGCCTCCTTTGAGGAGACTGTCGACATCCTCTTTGACGCGGCGGCCTTTG 434310 || ||| ||| || |||||||| || || ||||| | || |||||||| | Sbjct 253557 CGCTCATGCGCTGCTCGTTCGAGGAGACGGTGGAGATCCTGATGGAGGCGGCGGCGGCGG 253498 Query 434311 CCGAGACCGACAAGATCACCGACGGATCGGTCACCGAGCCCATCATTCTAGGCCAGGCGG 434370 ||||| ||| | | |||| | ||| ||||| | || | || |||||| | Sbjct 253497 GAGAGACGGACTACTGC----ACGGGT--GTCGCCGAGGCAGTCTTGCTCGGCCAGCAGC 253444 Query 434371 CGCCCATCGGCACGG 434385 |||| || ||||||| Sbjct 253443 CGCCGATGGGCACGG 253429 Score = 95.1 bits (104), Expect = 2e-13 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 429067 TCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACGG 429126 |||||||||||||||| || | |||||||| | ||||||||||| ||| |||| ||| Sbjct 256825 TCAAGGGCAAGGAGGGTCGTCTGCGCGGCAACTTGATGGGCAAGCGTGTCGACTTCTCGG 256766 Query 429127 CGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGTGCCCTATG 429186 | || ||||||||| ||| || | ||| | |||||||| |||||||| || Sbjct 256765 CTCGTACCGTCATCACGGGCGATCCAAACCTCGCTCTCGACGAGGTCGGCGTGCCGTACT 256706 Query 429187 AGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226 ||||| |||| | || | || |||||||| ||||| Sbjct 256705 CGATCGCACGGACGTTGACGTACCCTGAGCGCGTCACGCC 256666 >seq3 Length=1857496 Score = 105 bits (116), Expect = 1e-16 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||| ||| |||| |||||||||||||||||||| | ||| ||||| ||||| ||| Sbjct 753929 CCGACGCGCTCGAAGATGTCGTTGACAAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 753988 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 |||||| ||||||||| ||||||||||| |||||||| Sbjct 753989 ATGCCCGTGTCGGGGTGGACCTGCTTGAGGACCTTGTA 754026 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||||||||| ||||| |||| ||||||| | | || |||||| | | || Sbjct 790779 ACTTGGTGACGGCCTTGGTGCCCTCCGAGATGGCGTGCTTCGAGAGCTCGCCGGGAAGGA 790720 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 790719 TGAGGCGGACGGAGGTTTGGATCTCGCG 790692 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| |||||||||||||| |||| ||||||| | | || |||||| | | || Sbjct 792951 ACTTGGTGACAGCCTTGGTACCCTCAGAGATGGCGTGCTTCGAGAGCTCGCCGGGGAGGA 793010 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 793011 TGAGGCGGACGGAGGTTTGGATCTCGCG 793038 Score = 89.7 bits (98), Expect = 8e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 ||| ||||||||||| || ||||| |||| ||||||| | | || |||||| | | ||| Sbjct 753723 CTTCGTGACGGCCTTCGTGCCCTCCGAGATGGCGTGCTTCGAAAGCTCGCCGGGGAGGAT 753782 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||| ||||| |||||||||||||||| Sbjct 753783 GAGGCGGACGGCCGTCTGGATCTCGCGGG 753811 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||||||| || | ||||||||||| |||||||| | ||| ||||| ||||| ||| Sbjct 793159 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 793218 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAG 1485723 || || ||||||||| |||||||| | ||||||||| | | |||||| Sbjct 793219 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 793269 >seq2 Length=1972963 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||| ||||||||||| |||| ||||||| | | || |||||| | | || Sbjct 435007 ACTTGGTGACGGCTTTGGTACCCTCAGAGATGGCGTGCTTCGAGAGCTCGCCGGGGAGGA 434948 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | ||||| |||| ||| ||||||||||| Sbjct 434947 TGAGGCGGACGGAGGTTTGGATCTCGCG 434920 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||||||| || | ||||||||||| |||||||| | ||| ||||| ||||| ||| Sbjct 434798 CCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAG 434739 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAG 1485723 || || ||||||||| |||||||| | ||||||||| | | |||||| Sbjct 434738 ATACCGGTGTCGGGGTGGACCTGCTTCAACACCTTGTAGATGTACGACGAG 434688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243208763170