Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001255795.1_202015-07-
26] 30 sequences; 20,810,536 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq14 127 2e-24
>seq14
Length=779201
Score = 127 bits (140), Expect = 2e-24
Identities = 148/197 (75%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 30261 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30320
|||| || || ||||||| ||| ||| |||||| ||||| ||||| | | ||| | |
Sbjct 242741 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 242800
Query 30321 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGT 30380
| |||| | |||||| ||||||||||||| || |||||||| | ||| | || ||||
Sbjct 242801 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 242860
Query 30381 TTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30439
||| | ||||| ||||||||||| ||||||||| | || | | | | ||||| | |
Sbjct 242861 CCGTGCATCCCTC-GACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGC 242919
Query 30440 TTGGTCGTGAGGAGGGG 30456
|||||||| ||||| ||
Sbjct 242920 TTGGTCGTCAGGAGCGG 242936
Score = 98.7 bits (108), Expect = 8e-16
Identities = 130/178 (73%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 29857 CCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAG 29916
|| ||||||||| ||||| ||||| || |||| || ||||||||||| ||||| || ||
Sbjct 242180 CCGCTCGAGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAG 242239
Query 29917 GTTGTGGACAAACTC-TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29975
| | ||| ||||| | || || | ||| |||| |||| ||||||| ||| | ||
Sbjct 242240 CTGGAGGATGAACTCGTGTGGGATCGTG-TCGGAGACGAGAGCGATCATGTGCGTCAAGA 242298
Query 29976 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 30033
| | || ||||||||| ||||| || ||||| || | ||| | || | ||||||
Sbjct 242299 GCGCATACGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTA 242356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310251442760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |