Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq31 111 3e-19 seq329 104 5e-17 seq267 104 5e-17 seq262 104 5e-17 seq247 104 5e-17 seq170 104 5e-17 seq99 104 5e-17 seq42 104 5e-17 seq25 104 5e-17 seq21 87.8 4e-12 >seq31 Length=506143 Score = 111 bits (122), Expect = 3e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 230383 CAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGT 230442 |||||||| | ||||| || || | ||| |||| ||| | ||||| | || || Sbjct 246867 CAAATCATCGCCGAAGCCGTCGAGATCGAGCAGGAATTCCTGACGGACGCCTTGCCC-GT 246809 Query 230443 CGCCTT-ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCG 230501 || ||| || ||||||||||| || ||| ||||||||||||| ||||| || ||||| Sbjct 246808 CGGCTTGATCGGCATGAACGCGACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCG 246749 Query 230502 CATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTAT 230561 | |||| || ||||| ||||||| ||||||| | ||||||| || | ||||| Sbjct 246748 ATTGCTTGTCGCGCTTGGGAACGAGAAGCTGTACAATGCCGAGAACCCGTTCGACTTTAT 246689 Query 230562 GGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||| | || ||| | | || |||||||| Sbjct 246688 GGAGATGATCTCGATGGAGGGCAAGACCAA 246659 >seq329 Length=178956 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 159983 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 159924 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 159923 CCCACATTGGGC 159912 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 165210 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 165151 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 165150 CCCACATTGGGC 165139 >seq267 Length=44046 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 34935 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 34876 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 34875 CCCACATTGGGC 34864 >seq262 Length=378635 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 212460 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 212401 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 212400 CCCACATTGGGC 212389 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 225520 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 225579 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 225580 CCCACATTGGGC 225591 >seq247 Length=265135 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 259100 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 259041 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 259040 CCCACATTGGGC 259029 >seq170 Length=155406 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 154325 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 154384 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 154385 CCCACATTGGGC 154396 >seq99 Length=498000 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 205538 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 205597 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 205598 CCCACATTGGGC 205609 >seq42 Length=184044 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 35869 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 35810 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 35809 CCCACATTGGGC 35798 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 48905 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 48964 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 48965 CCCACATTGGGC 48976 >seq25 Length=277801 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 233363 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 233422 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 233423 CCCACATTGGGC 233434 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 239911 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTGGTCGTGGGTTCGAGC 239970 Query 165770 CCCACGATGGGC 165781 ||||| ||||| Sbjct 239971 CCCACATTGGGC 239982 >seq21 Length=367166 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||| || || ||| | ||||||||||| || || ||||||||| | Sbjct 351966 CTCATCGGCATGAACAGCGACCTCATGTGCCAGTACATCGAGTTTGTTGCCGACCGCTTG 351907 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| |||||||| ||||||| | ||| || ||||||| || | || |||||| Sbjct 351906 CTTGTCGCACTTGGCAACGAGAAGATCTACCACAAGGAGAACCCGTTCGACTTCATGGAG 351847 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAA 230591 | || ||| | | || |||||||| Sbjct 351846 ATGATCTCGATGGAGGGCAAGACCAA 351821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819053019950