Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq74 104 3e-17
seq31 82.4 9e-11
>seq74
Length=129003
Score = 104 bits (114), Expect = 3e-17
Identities = 360/555 (65%), Gaps = 14/555 (3%)
Strand=Plus/Minus
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069
||| || |||| | || || || | ||| ||||| || || |||||||| || | ||
Sbjct 35633 CCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATCCAAAGGGCAAAGAA 35574
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
| || | | | ||||| || || ||||| || ||||||||| | |
Sbjct 35573 CAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAA 35514
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
|| || | |||||||| || | ||| |||| | | || || || ||||| |||||
Sbjct 35513 GATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTCC 35454
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | ||| | || ||||| || || || | | ||| || || || || || ||
Sbjct 35453 CTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 35394
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309
|| || || |||| ||| || || | || || || || || || || ||
Sbjct 35393 GTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCC 35334
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCT 54368
|| || |||||| | || ||||| | ||||| ||| || | ||| || ||||||||||
Sbjct 35333 GATGCCGCCTGCCGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCT 35275
Query 54369 CTATACTATCATCCATCAT-GTTAAGTAGAA-AACAGCTAGACATTTGGTGACGACTAGT 54426
| || || ||| |||| || | | ||| || | ||| | || || | ||
Sbjct 35274 CGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGC--GT 35217
Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486
|| || || || | || || || ||||||||||| | || || | || |||||
Sbjct 35216 GCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTA 35157
Query 54487 CGTCTCGATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTA 54542
||||||||| || ||| || || || | |||| || || ||||| ||||| |
Sbjct 35156 CGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATG----CCGACCGCGACGCGCATGA 35101
Query 54543 ACATGTGCTGAGGTC 54557
||||||||| ||||
Sbjct 35100 GCATGTGCTGCGGTC 35086
>seq31
Length=506143
Score = 82.4 bits (90), Expect = 9e-11
Identities = 115/161 (71%), Gaps = 3/161 (2%)
Strand=Plus/Plus
Query 24183 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 24242
|| ||||| | |||||||| | |||||||||||||||||| || || || || || ||
Sbjct 247023 GAGAACGTCAAGCCGGGCATCAAGCCACGCTTTTTAAGCCAGAAGATCGAGGCGAACGAG 247082
Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG 24302
|| || ||||| || || || ||||| || || || | |||| ||| || | |||||
Sbjct 247083 CCGGAGAAGAAGATGCCCTCGACTGCGGCGAAAGCGACCAGTCGTTCCGCAAACACGGCG 247142
Query 24303 C---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340
| ||| ||||| | ||||| |||||||||||
Sbjct 247143 CGAGGGTCCGAGATCCATCGCAGCGCCCACTCGGCCTTCTT 247183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718891145200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |