Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq161 125 8e-24 >seq161 Length=91608 Score = 125 bits (138), Expect = 8e-24 Identities = 141/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| || ||||| ||||||| |||||||||||||||||| || || | || Sbjct 53578 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGTTGGAGG 53519 Query 145732 ATGAAGTCCC-CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 ||||| || ||| ||| | | |||| | |||||| ||||| ||||| |||| ||| Sbjct 53518 ATGAACTCATGCGGTATCGTGTCG-GTGACGAGGGCGATCATGTGCGTCAGGAGGGCGTA 53460 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| |||||||||||||| || || || | ||| | ||||||||||||| |||| Sbjct 53459 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACATGAGGCA 53400 Query 145851 GGAGAG 145856 |||||| Sbjct 53399 GGAGAG 53394 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 ||||||||||||| |||| || || |||| |||| || ||| | | |||||| Sbjct 53024 ACCCGTAGACGGGTCCCAAATCACCCACTTCCCGGTGCTGCAAGCCGCGCGAGTCGAGGA 52965 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188 | || ||| |||||| | |||||||||||||||||| || | | | | | || |||| Sbjct 52964 ACTCTCGGCTGCCGTTGCCATCCCAGATCTTGACGCCCTTCTCCGCCAACACCTTCGAGT 52905 Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248 | ||| | ||| || ||||| | |||||| |||| || || | | | ||||| | | Sbjct 52904 CGGTGCATCCCTCGACAAACCACAACAGCTCCTCGATGATGCCGCGCGAAAAGACGCGTT 52845 Query 146249 TGGTGGTCAGCAGGGGGA 146266 |||| |||| || |||| Sbjct 52844 TGGTCGTCAAGAGCGGGA 52827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074107774600