Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq263 87.8 1e-12 >seq263 Length=148700 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 |||||||| || |||||||| || || | |||| | ||||||| ||| |||||| | Sbjct 47240 CCAGAGATTGGTGACAAGTTCGCCTCTCGCCACGGTC-AGAAGGGTACGATCGGCATTAC 47182 Query 33630 GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAA 33689 ||| ||| ||||||||||||| | ||||| || | || ||||| ||||||| Sbjct 47181 CTACCGCCACGAGGACATGCCGTTCTCCGCCGAGGGGATCACGCCCGACCTGATCATCAA 47122 Query 33690 CCCGCATGCGTTCCCCTCGCGCATGAC 33716 ||| || || ||||||| |||||||| Sbjct 47121 CCCTCACGCCATCCCCTCCCGCATGAC 47095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232015317095