Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq74 114 2e-20 >seq74 Length=129003 Score = 114 bits (126), Expect = 2e-20 Identities = 351/536 (65%), Gaps = 14/536 (3%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || | ||| ||||| || || |||||||| || | || | || | | | | Sbjct 35614 ACACGCTCCATGAAGAGGTCGGGGATCCAAAGGGCAAAGAACAAGTCGCGCGCGCGGACC 35555 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| || ||||||||| | | || || | |||||||| Sbjct 35554 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGC 35495 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| ||||| | | ||||| || ||||| |||||||| || | ||| | || Sbjct 35494 TCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCC 35435 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || || || | | ||| || || || || || || || || || |||| | Sbjct 35434 GTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCG 35375 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || || || | || || || ||| || || || || || || |||||| | || Sbjct 35374 ATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTG 35315 Query 72322 GAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||||| | ||||| ||| || | ||| || ||||||||||| || || ||| |||| Sbjct 35314 GAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCAT 35256 Query 72381 -GTTAAGTAGAA-AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438 || | | ||| || | ||| | || || | || || || || || | || Sbjct 35255 CGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGC--GTGCCGGCGTTGAAGAGCGTC 35198 Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498 || || ||||||||||| | || |||| || ||||||||||| || || || Sbjct 35197 GGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCA 35138 Query 72499 ATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550 || || || | |||| || |||||||| ||||| | ||| ||||| |||| Sbjct 35137 ATGTCGTCGCCGTGGATG----CCGACCGCGACGCGCATGAGCATGTGCTGCGGTC 35086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136137927400