Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq314 150 2e-31
seq3 125 7e-24
seq74 123 2e-23
seq94 120 3e-22
seq361 111 1e-19
seq144 109 5e-19
seq98 89.7 5e-13
seq21 86.0 6e-12
seq111 82.4 7e-11
>seq314
Length=39162
Score = 150 bits (166), Expect = 2e-31
Identities = 172/230 (75%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||||||||| | || ||| | ||| | || |||||||| || |||||||| |||||
Sbjct 39009 GCCACCGCGCAACCTCAACACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCT 38950
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| |||||| ||||||||||| ||| |||| || ||||||||||| |||||
Sbjct 38949 GAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGG 38890
Query 131127 GATT-CCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| || || ||||| || || ||||| | || | || || | |||||||
Sbjct 38889 GATTCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGA 38830
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| |||||||||
Sbjct 38829 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 38780
>seq3
Length=57953
Score = 125 bits (138), Expect = 7e-24
Identities = 166/229 (72%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | ||||||||| | || | |||||||||||| || |||||||||||
Sbjct 50788 GCCTCCGCGGAGACGCAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 50729
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| |||||||| || ||| |||| || ||||||||||| |||||
Sbjct 50728 AAGAGTACGACCATCCTCGAGCTGCTTCCC-GCGAAGATCAAGCGCTGCTGGTCGGGAGG 50670
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || || ||||| | || | || || | ||||| |
Sbjct 50669 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCAAC 50610
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| |||||||||
Sbjct 50609 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 50561
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| ||||| | || | || ||||| || || |||||||||||
Sbjct 51333 CCACCGCGAAGACGAAGCACCAGGTGCAGCGTAGACTCTTTCTGGATGTTGTAATCTGAA 51274
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| || ||||||||||| ||||||
Sbjct 51273 AGCGTGCGTCCGTCCTCAAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 51214
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
|| || || ||||| ||| || ||||| |||
Sbjct 51213 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACCTG 51179
>seq74
Length=129003
Score = 123 bits (136), Expect = 2e-23
Identities = 303/448 (68%), Gaps = 21/448 (5%)
Strand=Plus/Minus
Query 146049 AGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCAC 146105
||||||| ||||||||||| || | |||| ||||| || || || ||| || |
Sbjct 35514 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTC 35455
Query 146106 CCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165
||||||| |||| || || ||||||| | ||||| | |||||| || |||| | |
Sbjct 35454 CCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 35395
Query 146166 CTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGC 146225
||||||||| | || | ||| | ||| | | || | | ||
Sbjct 35394 AGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGC 35335
Query 146226 CGAGACCGCC-GCCGTACTTGGATAT-AGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGC 146282
||| ||||| ||||| |||||| || |||| |||| ||| |||||| ||||||||||
Sbjct 35334 CGATGCCGCCTGCCGT-CTTGGAGATGAGCG-CGCACGTCTT-GAGCGTGTCGTAGATGC 35278
Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340
| || || ||| |||| || || || |||||||| | | ||||| |||
Sbjct 35277 CCTCGATCGAGTCGTCCTTC--ATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGG 35220
Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCT----CATCA 146396
||| || || ||| | |||||| |||||||||||| | | ||| ||| |
Sbjct 35219 CGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAA----GTACCGCTCCGACATGA 35164
Query 146397 TCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCA 146456
||||| ||||| ||| | |||||||||||| || ||||| | ||||||||||
Sbjct 35163 GGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCA 35104
Query 146457 TGAGCATGTGTTGGGGCCGCTCCGCCAC 146484
|||||||||| || || ||||| |||||
Sbjct 35103 TGAGCATGTGCTGCGGTCGCTCGGCCAC 35076
Score = 104 bits (114), Expect = 2e-17
Identities = 353/548 (64%), Gaps = 4/548 (1%)
Strand=Plus/Minus
Query 144748 GGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCGTGTATCGA 144807
|||||| | |||||||||||||| ||||| || ||| |||| ||| |||||
Sbjct 36960 GGTGCGGAGGTAGTACATGCCCGTCTTGAGACCTTTCTTCCATCCGTAGAAGTGCATCGA 36901
Query 144808 CGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTTTGATCAAT 144867
||| | | | || || ||| || | | || ||||| || || || ||
Sbjct 36900 CGTGAGCTGCGCCATGGTCGGCGACGAGAGGTGGACGTTGAGCGACTGCGACTGGTCGAT 36841
Query 144868 GAAAGCGTTGCGGTCGGCGGCCATCTCAATCATA--CGTTTGCATTTCATTTCCCAAGCG 144925
||| ||| |||||||||||| | || || | | ||||| || ||||| ||
Sbjct 36840 GAACGCGCCGCGGTCGGCGGCGAGGTCGATGACGACCTTTTGCGAG--ATCTCCCACACG 36783
Query 144926 GTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGACCCCTTG 144985
|||||||| | || || | | ||| || |||||| | ||| ||||| || |||
Sbjct 36782 GTCTTGTAGATGCGCTTGAGCTCGTCGGGGATGCCGGGGACGTTCTGGATCGAGCCGTTG 36723
Query 144986 TGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCAAGTCGTCA 145045
||||| | || | |||| ||| || | |||| | || | ||||
Sbjct 36722 TGCGCGATGATCGTGTTCTTCATCGCGTCGTTCCACAGGCCGCGGTCGACGAGGTCGCGG 36663
Query 145046 ATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTA 145105
| | | | ||||||||||| ||||||||||| | || || || || | |||
Sbjct 36662 AGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGGACGCGGCGGGTGTAGATGTTG 36603
Query 145106 GACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGC 145165
|||||| | || || || | |||||| ||| ||||| || ||||| ||||| |||
Sbjct 36602 GACGTGTACGGCTCGAACGCCTCGTTGAAGCCGAGGATCTGGCTGGTCGAGGCGGTAGGC 36543
Query 145166 ATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTA 145225
|| ||| || | || ||||| | |||||||| | || | ||||| | |
Sbjct 36542 ATCGGCGCGCACACGAGCGAGTTGCGGATGCCGTGCTGCGCAATCTTCTCCTTCAACTCG 36483
Query 145226 CCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCG 145285
|||| ||||| || |||||| | |||| ||||| ||||||||||| | ||| | |
Sbjct 36482 GCCCAGTCCCACAGGTCCGTCGGCGTGACGTTCCACAGATCGTACTGCAAGAGGCCGTGG 36423
Query 145286 CTGGCGGG 145293
|| |||||
Sbjct 36422 CTCGCGGG 36415
>seq94
Length=311871
Score = 120 bits (132), Expect = 3e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | ||| ||||| | || | ||||||||||| |||||||| || |||||
Sbjct 106363 GCCACCGCGGAGACGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTATAGTCGCT 106304
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||
Sbjct 106303 GAGCGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGG 106244
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||||| | || | || |||| |||||||
Sbjct 106243 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 106184
Query 131187 GTCGACGGT 131195
|||| |||
Sbjct 106183 CTCGAGGGT 106175
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||||||||| | || | ||||||||| || || |||||||||||
Sbjct 106052 CCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCCGAA 105993
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| | |||||||||||| ||||||
Sbjct 105992 AGAGTACGACCGTCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 105933
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 105932 ATGCCCTCCTTGTC 105919
>seq361
Length=17270
Score = 111 bits (122), Expect = 1e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | ||||||||| | || | ||||||||| || || |||||||||||
Sbjct 8695 GCCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCCGA 8754
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || |||||| |||||||| || ||| |||| | |||||||||||| |||||
Sbjct 8755 AAGAGTACGACCGTCCTCGAGCTGCTTCCCCGCGAAGATAAGACGCTGCTGGTCGGGAGG 8814
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
|||||| || ||||| ||| || ||||| |||
Sbjct 8815 GATTCCCTCCTTGTCCTGGATCTTGGCCTTGACCTG 8850
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||||||||| | || | ||||||||| || || |||||||||||
Sbjct 9136 CCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCCGAA 9195
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| |||| | |||||||||||| ||||||
Sbjct 9196 AGAGTACGACCATCCTCGAGCTGCTTCCCCGCGAAGATAAGACGCTGCTGGTCGGGAGGG 9255
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||||| || ||||| ||| || ||||| |||
Sbjct 9256 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACCTG 9290
>seq144
Length=22955
Score = 109 bits (120), Expect = 5e-19
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||||||||| | || || | || | |||||| ||||||||||||||||||||
Sbjct 213 CCACCGCGCAACCTCAAAACGAGGTGCAGGGTCGATTCCTTTTGAATGTTGTAATCTTGA 154
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| || ||||||||||| || |||
Sbjct 153 AGCGTGCGTCCGTCCTCAAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGCGGG 94
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || |||| |||||||
Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 34
Query 131188 TCGACGGT 131195
|||| |||
Sbjct 33 TCGAGGGT 26
>seq98
Length=54307
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096
|||||||||||| ||||||||||| || | ||||| |||||| |||||||||||
Sbjct 35373 GGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCC 35432
Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156
|| |||| | ||||||||||| || ||||| || || ||||| ||| || |||
Sbjct 35433 GGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 35492
Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195
|| | || | || || | ||||||| |||| |||
Sbjct 35493 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGGGT 35531
>seq21
Length=367166
Score = 86.0 bits (94), Expect = 6e-12
Identities = 212/312 (68%), Gaps = 10/312 (3%)
Strand=Plus/Minus
Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTA-TAA 46319
|||||||| || ||||||||||| || || || || |||||||| || ||| || |
Sbjct 352126 AACGAGCTCATCTCGCGCGACGAAGGTCTCCACACCGACTTTGCCTGCCTCCTCTTCTCG 352067
Query 46320 CAC-TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGG 46378
||| ||| | || || | || | |||||||| || | |||| || |||||||
Sbjct 352066 CACCTCGAGCGC-CGCC---CTCACCCCCGACACGGTCGAGCGCATCATCCGCGAGGCGG 352011
Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC- 46437
| | || ||| | ||||| | |||| || ||||||| || | |||||||||
Sbjct 352010 TCGAGATCGAGCAAGAGTTCCTCACGGAGGCGCTGCCCGTCAAGCTCATCGGCATGAACA 351951
Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT-GCAGCTTCA 46496
|| ||| ||||| | |||||||||||||| || ||||| |||| || ||| |||
Sbjct 351950 GCGACCTCA-TGTGCCAGTACATCGAGTTTGTTGCCGACCGCTTGCTTGTCGCA-CTTGG 351893
Query 46497 CCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556
| | |||| | ||| | || || || || || ||| | | ||||| ||||
Sbjct 351892 CAACGAGAAGATCTACCACAAGGAGAACCCGTTCGACTTCATGGAGATGATCTCGATGGA 351833
Query 46557 GGGCAAAACTAA 46568
|||||| || ||
Sbjct 351832 GGGCAAGACCAA 351821
>seq111
Length=69946
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | |||| || | ||| | |||||| ||| |||||| ||||| ||
Sbjct 54377 GCCGCCGCGTAGGCGCAAGACGAGATGAAGGGTCGAATCCCTTTGAACCTTGTAGTCTTC 54318
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| |||||| |||||||| || ||| | || | ||||||||||| |||||
Sbjct 54317 GAGCGTGCGGCTGTCCTCGAGCTGCTTCCCCGCGAACATGAGCCGCTGCTGGTCGGGAGG 54258
Query 131127 GATTCCTTCTTTGTC 131141
||| || || |||||
Sbjct 54257 GATGCCCTCCTTGTC 54243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010646441600
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