Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 5e-12
>seq3
Length=57953
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/199 (70%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||||||||| | ||||||| ||| || || || || ||
Sbjct 50757 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGACCATCCTCGAGCTGCTT-CCC 50699
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | ||||| ||||| ||||| ||||| || ||||| |||||| ||
Sbjct 50698 GCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 50639
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | ||||| | || || || || | ||| | || |||||||| || ||
Sbjct 50638 ACATTGTCGATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 50579
Query 114366 TTTACAAAAATCTGCATGG 114384
|| || || ||||||||||
Sbjct 50578 TTGACGAAGATCTGCATGG 50560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132531058380
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