Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq99 260 2e-64 seq324 132 6e-26 seq62 132 6e-26 seq334 125 9e-24 >seq99 Length=498000 Score = 260 bits (288), Expect = 2e-64 Identities = 637/964 (66%), Gaps = 5/964 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 || || || | |||||| || ||||| | || ||||| ||||| ||||| || ||||| Sbjct 435336 TCGCCGGTGAGGATGGCAGCCTGGACGGCGGCGCCGTACGCGACGGCCTCGTCCGGGTTG 435395 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || | || || ||| || | || || | | | || | |||| Sbjct 435396 ATCGACTTGTTGGGCTCCTTGCCGCCGAAGAAGTCGGAGACGAGCTTCTGGACACGCGGG 435455 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || ||||| || ||||| | || || || | || | || || ||||| ||| Sbjct 435456 ATACGGGTCGAGCCGCCGACGAGGACAATCTCGTGGACCGACTGCTTGTCAATCTTCGAG 435515 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||| | |||| || || ||| Sbjct 435516 TCGCGGAGGACCTTCTCGACGGGCTCCATGGTCGAGCGGAAGAGGTCCTGGCAGAGCTCC 435575 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || ||||| || || || ||||| || | ||| ||| | | ||| || || Sbjct 435576 TCGAAGCGGGCGCGGGTGATCGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGATC 435635 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || || || || || | ||| || | || ||||| |||||||| || || || || Sbjct 435636 TCGATCGTGGTCTGGGCGGCCGACGAGAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCGG 435695 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | || || ||||| || | ||| || | || ||||| | || || || ||||| Sbjct 435696 AGGCGGCGGAGGGCGCGGGCGTTCGACGAGAGGTCCTTCTTGTTCTTGCGCTTGAACTCG 435755 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | ||||| | ||| | || || || || || || | ||| || || || Sbjct 435756 GCGACAAAGTGGTTGACGAGGCGGTTGTCAAAGTCCTCGCCGCCGAGGTGGGTGTCGCCG 435815 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || ||||| || | || || | | | ||| || || ||||| Sbjct 435816 GCGGTGGCCTTGACCTCGAAGATGCCCTCCTCGATCGTGAGGAGCGAGACGTCGAACGTG 435875 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || |||| ||| || ||||| |||||| | ||| | || ||||| ||||| ||| Sbjct 435876 CCGCCTCCCAAGTCGAAGATGAGGACGTTCTTCTCGCCCTCGGACTTCTTGTCGAGGCCG 435935 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 |||||||| || || || || || || || || || || || ||| ||||| | || Sbjct 435936 TACGCGATGGCGGCGGCGGTGGGCTCGTTGATGATGCGGAGGACGTTGAGGCCCGAGATC 435995 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | || || || || || || || ||||| ||||| |||||||| ||||| || ||| Sbjct 435996 AAGCCGGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 436055 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| | ||||| || | || || | || ||||| ||| || Sbjct 436056 ACGGCGTTGGCGACGGTGCCGCCGAGGTAGGCCTCGGCCGTCTCCTTCATCTTGAGGAGG 436115 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 |||||||| || ||||| || | || |||| ||| || || || | || || Sbjct 436116 ACCATCGACGAGATCTCCTCGGGCGTGAACTCCTTCTGCTCGCCCTTGTACTCGACCGAG 436175 Query 7850 ATCATGGGTTTATCCGCAGCAC-CGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || ||||| || ||| || | ||| ||||| ||| ||| | ||||| ||| Sbjct 436176 ATGATGGGCTTGCCCG----ACTTGTCGATGACCTTGAACGGCCAGTGCTTCATGTCGGA 436231 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| ||| | |||||| | |||||| || ||||| || ||||| || ||| | Sbjct 436232 CTGGACCTCGGCGTCGGCAAACTTGCGTCCGATGAGGCGCTTGGCGTCAAAGACGGTGCT 436291 Query 7969 TTTG 7972 ||| Sbjct 436292 GTTG 436295 >seq324 Length=116657 Score = 132 bits (146), Expect = 6e-26 Identities = 522/812 (64%), Gaps = 27/812 (3%) Strand=Plus/Plus Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 || || | || |||||| ||||| | || ||||| ||||| ||||| |||||||| ||| Sbjct 50284 CCGGTGAGGACGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCGTCGGGGTTGATC 50343 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | || || || | ||| ||| | || || | | || || || ||||| Sbjct 50344 GACTTGTTGAGCTGGCGGCCGCCAAAGAACTCGGAGACGAGCGACTGGATCTTGGGGATA 50403 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC- 7191 || ||||| || ||||| | || || || | || || || || |||||||| | ||| Sbjct 50404 CGGGTCGAGCCGCCGACGAGGACAATGTCGTCGACCTTGGACTTGTCGATCTTGGCGTCC 50463 Query 7192 -TC--GAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 || || | | | |||| || || | ||||| ||| | | || Sbjct 50464 TTCAAGACGCGCT----CGACGGGGTCGAGGGTCGAGCGGAAG--GTCGCGGCGTTGATC 50517 Query 7249 --CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||| || || ||||| | || || | |||| || ||| | | | | ||| || Sbjct 50518 TCCTCGAAGCGGGCACGCGAGATCGAGGCCGAGAAGTCCTGGCCCTGGAAGAGCGAGTCG 50577 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | ||| || || || || || || | || ||||| || ||||| ||||||| Sbjct 50578 ACCTCGACGGTGGTCTGGGTGACG--GACGAGAGGGTGCGCTTGGCACGCTCGCACGCCG 50635 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424 || | ||| || || || || | || || || || || ||| || || | || Sbjct 50636 AGCGGAGACGGCGGAGCGCGCGGGCGTCGCCCGAGATGTCGAGCTTGGTCTTGCGCTCAA 50695 Query 7425 ACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 |||| | |||||| |||| |||| | || || || ||||| || | ||| || Sbjct 50696 ACTCCTTCTTGAAGTGCTCGA-GGAGCGTGTTGTCAAAGTCCTCACCGCCGAGGTGGGTG 50754 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || || ||||| ||||| |||||| || || || | | ||| ||||| Sbjct 50755 TCTCCGGCCGTCGCCTTGACGGCAAAGACGCCACCGGTGATCGAGAGGAGCGAGACATCG 50814 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-------CGTCTTTGTT 7596 ||||| || || || ||||| || ||||| || || | || | | ||| || Sbjct 50815 AACGTGCCGCCTCCGAGGTCGAAGATGAGGACAATCTTCTCCTTCTTCGACTTCTCGGTC 50874 Query 7597 --CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || |||||||||||||||| || ||||| || || || || || || || || | Sbjct 50875 GCCTCGCCGAGACCGTACGCGATCGCAGCCGCGGTGGGCTCGTTGATGATGCGGAGGACG 50934 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 | |||||||| || || | || || || |||| | || ||||| ||||| |||||| Sbjct 50935 TCGAGGCCAGCGATCGTGCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAG 50994 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || |||||||| | ||| || | | |||| | ||| || | | | ||| || | || Sbjct 50995 GCAGGGACCGTGATGACGGCCTTCTTGACCTCCTTGCCAATCTTGGCTTCGGCCGTCTCC 51054 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 || | |||| |||||||| | || ||||| Sbjct 51055 TTGAGCTTGGAGAGAACCATGGCCGAGATCTC 51086 >seq62 Length=225221 Score = 132 bits (146), Expect = 6e-26 Identities = 420/647 (65%), Gaps = 12/647 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || || || | ||| || || || ||||| || |||||| || | ||| Sbjct 133202 TCAAAGTCCTCGCCGCCGAGGTGGGTGTCACCGGCGGTGGCGAGGACTTCGAACACACCG 133261 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| || || ||||| || || || ||||| | | || | | Sbjct 133262 TCGTCGATCGAGAGGAGCGAGACGTCGAACGTGCCGCCGCCGAGGTCGTAGACGATGATG 133321 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || | | |||| ||||| ||||||||||| || || ||||| || || Sbjct 133322 TTGCGCTCGCCGCC---GGTCTTGTCGAGTCCGTACGCGATCGCGGCGGCCGTCGGCTCG 133378 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | || || ||| || || || || || | || || || || || || || Sbjct 133379 TTGACGACGCGGAGGACGTTGAGACCCGCGATCGTGCCGGCGTCCTTGGTGGCCTGGCGC 133438 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| |||||| || | ||||| Sbjct 133439 TGGGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGCGTGACCTTGGTTCCGAGG 133498 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 |||| || || | || ||||| ||| || ||||| | || | ||| || | | Sbjct 133499 TACGTCTCGGCCGTCTCCTTCATCTTGCCGAGGACCATGGCCGAGACCTCCTCGGGGGTG 133558 Query 7817 AA---CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 || || || | || ||| | | || || |||| ||| | | || | ||| Sbjct 133559 AATGTCTTGCTCTTGTCGCCG---ACCTTGACCTCGATCACGGGCTGCTTCGTCGAGCCG 133615 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | | ||||| ||| | | |||| ||| ||||||| | ||| ||| Sbjct 133616 GCCTTGACCTTGAACGGGTAGTGCGTCATGTCGCGCTGGACCTCCTTGTCGTCAAAGCGG 133675 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | |||||| || ||||| || ||||| | ||||| | |||||| ||| |||||| Sbjct 133676 CGTCCGATCAGGCGCTTGGCGTCAAAGATCGTGTTGGTCGGGTTCGAGGCGTACTGGTTC 133735 Query 7994 TTCGCCGCGTCCCCGATAAGACGTT--CATTATTTTCCGTA-AACGCGACGTACGATGGG 8050 || || ||||| ||||| || || | | | | | || |||||||| || ||| Sbjct 133736 TTGGCGGCGTCGCCGATCAGGCGCTCGCCGGACGAGGGGGAGAAGGCGACGTAGGACGGG 133795 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097 || | || || || |||||||| || || || || ||||| |||| Sbjct 133796 GTGATGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACGCGACCGTT 133842 >seq334 Length=220061 Score = 125 bits (138), Expect = 9e-24 Identities = 416/641 (65%), Gaps = 12/641 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || || || | ||| || || || ||||| || ||| ||||| | || Sbjct 191075 TCAAAGTCCTCTCCGCCGAGGTGGGTGTCACCGGCGGTGGCGAGGACCTCAAACACGCCG 191134 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| || || ||||| || || || ||||| | | || | | Sbjct 191135 TCGTCGATCGAGAGGAGCGAGACGTCGAACGTGCCGCCGCCGAGGTCGTAGACGATGATG 191194 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| || | | |||| ||||| ||||||||||| || || ||||| || || Sbjct 191195 TTGCGCTCGCCGCC---GGTCTTGTCGAGTCCGTACGCGATCGCGGCGGCCGTCGGCTCG 191251 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | || || ||| ||||| || || || | || || || || || || || Sbjct 191252 TTGACGACGCGGAGGACGTTGAGGCCGGCGATCGTGCCGGCGTCCTTGGTGGCCTGGCGC 191311 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| |||||| || | || || Sbjct 191312 TGGGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGCGTGACCTTGGTTCCAAGG 191371 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 |||| || || | || ||||| ||| || ||||| | || | ||| || | | Sbjct 191372 TACGTCTCGGCCGTCTCCTTCATCTTGCCGAGGACCATGGCCGAGACCTCCTCGGGGGTG 191431 Query 7817 AAC-TGTT--TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 ||| | || || | || ||| | | || || |||| ||| | | | | ||| Sbjct 191432 AACGTCTTGCTCTTGTCGCCG---ACCTTGACCTCGATCACGGGCTGCTTCATCGAGCCG 191488 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | | ||||| ||| | | |||| ||| ||||||| | ||| ||| Sbjct 191489 GCCTTGACCTTGAACGGGTAGTGCGTCATGTCGCGCTGGACCTCCTTGTCGTCAAAGCGG 191548 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | |||||| || ||||| || ||||| | ||||| | |||||| ||| |||||| Sbjct 191549 CGTCCGATCAGGCGCTTGGCGTCAAAGATCGTGTTGGTCGGGTTCGAGGCGTACTGGTTC 191608 Query 7994 TTCGCCGCGTCCCCGATAAGACGTT--CATTATTTTCCGTA-AACGCGACGTACGATGGG 8050 || || ||||| ||||| || || | | | | | || |||||||| || ||| Sbjct 191609 TTGGCGGCGTCGCCGATCAGGCGCTCGCCGGACGAGGGGGAGAAGGCGACGTAGGACGGG 191668 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCG 8091 || | || || || |||||||| || || || || ||||| Sbjct 191669 GTGATGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACGCG 191709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129902206600