Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq74 131 2e-25 seq46 91.5 2e-13 >seq74 Length=129003 Score = 131 bits (144), Expect = 2e-25 Identities = 479/737 (65%), Gaps = 15/737 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| ||||||||||||| || |||||||| | Sbjct 35088 CCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGACCGCGCG 35147 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| | |||| || | ||||| | || || ||||| Sbjct 35148 ATCGAGACGTACAACCTCATGTCGGAGCGGTA-CTTTACGCACGCGTCGCCGACGCTCTT 35206 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || |||||||| || | | ||||| || Sbjct 35207 CAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTCACGATGAAGGACGA 35266 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | ||| |||| ||||| ||| ||| || Sbjct 35267 CTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACGGCAGG 35326 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508 || || || | ||||| | | | || | ||||| ||| || || Sbjct 35327 CGGCATCGGCCTCTCGATCCACAACATCCGCGCGA--CCGGTTCGTACATCGCCGGCACG 35384 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || || || || ||||| ||||| | ||| ||| |||||||| Sbjct 35385 AACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACGGCGCGCTAC 35444 Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 || | | || | ||| ||| ||| | |||| ||||| | || || ||||| Sbjct 35445 GTCGA-CCAGGGAGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTCGAGCCGTGGCA 35503 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||||| ||| | |||||||| || | || ||||| || | || |||| || Sbjct 35504 CGCCGACATCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 35563 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | || | || | |||| ||||| || ||||| |||||| |||| || ||| || Sbjct 35564 GCGCGACTTGTTCTTTGCCCTTTGGATCCCCGACCTCTTCATGGAGCGTGTCGAGCAGAA 35623 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 || | ||| | || ||||| || | | |||| || |||||| ||| | || || Sbjct 35624 CGGCGACTGGCCCCTCTTCTGCCCGGCCGAGGCGCCCGGTCTCCACGAGGTCTACGGCGA 35683 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGTAC 75863 ||||| | | |||| |||||| || |||||||| | ||||| ||| || | | Sbjct 35684 CGAGTTCAAGGAGCTCTTTGAAAAGTACGAGAAGGAGGGTCGCGCCAA-GCGCACCATCC 35742 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | ||| | || | | ||| | || | ||| | | ||| ||||| || | || | Sbjct 35743 CCGCC-CAGAAGCTCTGGTACGCCGTCCTCGAGGCCCAGGTCGAGACGGGCAACCCCTTC 35801 Query 75923 ATGCTTTACAAGGATGC 75939 ||||| ||||||||||| Sbjct 35802 ATGCTCTACAAGGATGC 35818 >seq46 Length=135777 Score = 91.5 bits (100), Expect = 2e-13 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||||||||| || |||||| | ||| | || || ||||| || ||||| ||| Sbjct 249 GGTGCCAAGATCCCTCGCGGCGCCATCCTCTCCGGCCCTCCCGGTACCGGCAAGACGCTC 308 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 |||||| ||| | ||| || ||| | ||||| ||| || | || ||| | | | | Sbjct 309 CTCGCCAAAGCGACCGCAGGCGAAGCCGGCGTCCCCTTCCTCTCCGT-CTCCGGCTCCGA 367 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || || |||||||| || ||||| ||||||| | || ||||| || ||| | | Sbjct 368 GTTCGTCGAGATGTTCGTCGGTGTCGGTGCCAGTCGTGTCCGCGACCT-TTTCACCCAGG 426 Query 175455 CCGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG 175509 || ||| || || || || ||||||| || |||||||| ||| | || ||| Sbjct 427 CCAAGAAGAACGCGCCGTGCATCATCTTCATCGACGAGATTGACGCGATCGGAAAG 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566878151200