Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq74 136 4e-27
>seq74
Length=129003
Score = 136 bits (150), Expect = 4e-27
Identities = 303/444 (68%), Gaps = 13/444 (3%)
Strand=Plus/Minus
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
|||||||||||||||| || || | ||||| ||| | ||| || ||||| || |
Sbjct 35514 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTC 35455
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
|||||||||| | |||| || ||||||| ||||||| | |||||| | |||| |||
Sbjct 35454 CCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 35395
Query 148001 CAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059
||| |||||| ||| ||| | ||| || || | | ||| | | |
Sbjct 35394 -AGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGG 35336
Query 148060 CCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATG 148116
|| |||||||| ||||| ||| || ||| ||||| || | | || |||||||
Sbjct 35335 CCGATGCCGCCTGCCGT-CTTGGAGATGAGCGCGCA--CGTCTTGAGCGTGTCGTAGATG 35279
Query 148117 CCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175
|| ||||| ||||| || | || | | | || ||||| | | ||||| | |
Sbjct 35278 CCCTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCACGACGAGAGCTGCGGGTGCGG 35220
Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235
||| || || ||| || || || |||||||||||| | | ||| | |
Sbjct 35219 CGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTT 35160
Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295
|||||||| || ||| || |||||||||||||| ||||| | |||||||||||||||
Sbjct 35159 GTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 35100
Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319
||||||||| ||||| ||||| ||
Sbjct 35099 CATGTGCTGCGGTCGCTCGGCCAC 35076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609025461400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |