Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq74 143 3e-29
seq46 91.5 2e-13
>seq74
Length=129003
Score = 143 bits (158), Expect = 3e-29
Identities = 485/746 (65%), Gaps = 17/746 (2%)
Strand=Plus/Minus
Query 111348 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAA 111407
||||| |||||||||||||||||| |||| | |||||||| ||| | | ||| |
Sbjct 35826 TGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 35767
Query 111408 TAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
|| | ||| | | || | ||| || | || ||||| || |||||| |||||||
Sbjct 35766 CGGCGTACCAGAGCTTCTG-GGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 35708
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526
||| |||| | | ||||| || || | ||| |||||| || |||| | |
Sbjct 35707 TTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCC 35648
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| ||||| || | ||| | || | ||| || |||| |||||| ||||| || |||
Sbjct 35647 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATC 35588
Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646
|| |||| | || | || | || |||| || | || ||||| || |
Sbjct 35587 CAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 35528
Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 111706
|| |||||||| | ||| || |||||||| ||||| || |||| |||| | |||
Sbjct 35527 TCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC--- 35471
Query 111707 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
| ||| || | || | || |||||||| ||| ||| | ||||| |||||
Sbjct 35470 GGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 35411
Query 111761 GGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCA 111818
|| || || || | || | || || || || ||| ||| || | || | |
Sbjct 35410 GGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAC--GAACCGGTCGCGCGGA 35353
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| ||||| | || || || || ||| ||| ||||| |||| ||| | | |
Sbjct 35352 TGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGA 35293
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
| || | ||||| || | ||| ||||| ||||| | | || |||||||| || |
Sbjct 35292 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGA 35233
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-T 111997
|||||| || || || || |||||||| || || | ||||| | || ||||
Sbjct 35232 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACCGC 35174
Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| ||||| || ||| ||||| | | |||||||| || |||||||||||||
Sbjct 35173 TCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACC 35114
Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083
||||| ||||||| ||||| ||| ||
Sbjct 35113 GCGACGCGCATGAGCATGTGCTGCGG 35088
>seq46
Length=135777
Score = 91.5 bits (100), Expect = 2e-13
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 11678
||| || | ||| |||||||| || ||||||| || || || || ||| || |
Sbjct 482 CTTTCCGATCGCGTCAATCTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCCTG 423
Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738
| ||| || ||||| || | ||||||| ||||| || |||||||| || || | |
Sbjct 422 GGTGAAA-AGGTCGCGGACACGACTGGCACCGACACCGACGAACATCTCGACGAACTCGG 364
Query 11739 CGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797
| | ||| || | || ||| ||||| | ||| || ||| | ||| |||||||||
Sbjct 363 AGCCGGAG-ACGGAGAGGAAGGGGACGCCGGCTTCGCCTGCGGTCGCTTTGGCGAGGAGC 305
Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
||||| || ||||| || || | ||| | |||||| || ||||||||||||||
Sbjct 304 GTCTTGCCGGTACCGGGAGGGCCGGAGAGGATGGCGCCGCGAGGGATCTTGGCACC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029134604000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |