Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12- 03] 365 sequences; 33,389,656 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 4e-12 >seq3 Length=57953 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||| ||||| || || Sbjct 50562 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 50621 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| || || | || || || || Sbjct 50622 GACACGATCGACAATGTCAAGGCCAAGA-TTCAGGACAAGGAGGGCATCCCTCCCGACCA 50680 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || || || || || || || || | || ||| | |||||||| Sbjct 50681 GCAGCGCTTGATCTTCGCGGG-AAGCAGCTCGAGGATGGTCGTACTCTTTCGGATTACAA 50739 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 50740 CATCCAGAAGGAGTCGAC 50757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008096385420