Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001456015.1_202015-12-
03] 365 sequences; 33,389,656 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 1e-19
seq314 105 2e-17
seq361 87.8 4e-12
>seq3
Length=57953
Score = 113 bits (124), Expect = 1e-19
Identities = 153/212 (72%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || ||||| || ||||| || |||||||||||||| | | ||| | |||||
Sbjct 50772 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGACCATCC 50713
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | ||| | || |||||||| | | ||||||||| | | ||| || ||||| ||
Sbjct 50712 TCGA-GCTGCTTCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 50654
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || |||||| | || | |||| || ||| || || || || || ||
Sbjct 50653 TGAATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTC 50594
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 50593 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 50562
>seq314
Length=39162
Score = 105 bits (116), Expect = 2e-17
Identities = 150/210 (71%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| ||||| || |||||||| || ||||||||||| ||| | || | || || ||
Sbjct 38990 ACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGACCGTCCTCA 38931
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT-CCTTCCTTTTCTTG 152014
|| || || |||||||| | | ||||||||| | | |||| || ||||| || ||
Sbjct 38930 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCCTCCTTGTCCTG 38871
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||| || ||||| | || | | |||| ||| ||| || || || || || || ||
Sbjct 38870 AATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTT 38811
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||| ||||| ||||||| ||||||
Sbjct 38810 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 38781
>seq361
Length=17270
Score = 87.8 bits (96), Expect = 4e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || |||||||| |||||||||||||| | | ||| | |||||
Sbjct 9151 AGCACGAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCCGAAAGAGTACGACCATCC 9210
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||||| ||||||||||| | ||||||||| | | |||||| ||||| ||
Sbjct 9211 TCGAGCTGCTTCCCCGCGAAGATAAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 9270
Query 152013 TGAATTTT 152020
|| || ||
Sbjct 9271 TGGATCTT 9278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153815404084915
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |