Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq83 138 9e-28
>seq83
Length=1320507
Score = 138 bits (152), Expect = 9e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| | ||| || || |||| || || || ||||||||| |||||||||||| |
Sbjct 967753 GCCACCGCGCAACCTCAACACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGCT 967812
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| |||| |||| || || || || || ||||| ||||| ||||| |||||||||||
Sbjct 967813 GAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGG 967872
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||||||| ||| || ||| || | | | ||||| | ||| ||
Sbjct 967873 GATTCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 967932
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||| | ||| || |||||||| || || ||||| || ||||| ||||||
Sbjct 967933 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 967981
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||||||||| ||| ||||| |||||||| || || ||| |||| ||
Sbjct 967045 ACCAGGTGCAGCGTAGACTCTTTCTGGATGTTGTAATCTGAAAGCGTGCGTCCGTCCTCA 967104
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || ||||| ||||| ||||| ||||||||||| | |||||||||||||
Sbjct 967105 AGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 967161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074540347877
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |