Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01- 27] 137 sequences; 21,492,894 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 >seq2 Length=1651214 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 |||||||| || |||||||| || || | |||| | ||||||| ||| |||||| | Sbjct 1589702 CCAGAGATTGGTGACAAGTTCGCCTCTCGCCACGGTC-AGAAGGGTACGATCGGCATTAC 1589760 Query 33630 GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAA 33689 ||| ||| ||||||||||||| | ||||| || | || ||||| ||||||| Sbjct 1589761 CTACCGCCACGAGGACATGCCGTTCTCCGCCGAGGGGATCACGCCCGACCTGATCATCAA 1589820 Query 33690 CCCGCATGCGTTCCCCTCGCGCATGAC 33716 ||| || || ||||||| |||||||| Sbjct 1589821 CCCTCACGCCATCCCCTCCCGCATGAC 1589847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233005201211