Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 2e-12
seq36 86.0 8e-12
>seq2
Length=1651214
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/162 (72%), Gaps = 3/162 (2%)
Strand=Plus/Plus
Query 33351 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33410
||| || |||||||||||||| | ||| ||||| || ||||| || ||||| ||||| ||
Sbjct 1109063 GGAGAAGGTGAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGA 1109122
Query 33411 TCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33470
|| || |||||||| || || || || || || || | || | ||| || | |||
Sbjct 1109123 GCCGGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAAGACGGA 1109182
Query 33471 GCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
|| ||| | ||||| | | ||||| |||||||||||
Sbjct 1109183 GCGGTCGTCCGAGATCCAGGTGAGCGCCCACTCGGCCTTCTT 1109224
>seq36
Length=702765
Score = 86.0 bits (94), Expect = 8e-12
Identities = 116/161 (72%), Gaps = 3/161 (2%)
Strand=Plus/Plus
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
|| ||||| | |||||||| | |||||||||||||||||| || || || ||||| ||
Sbjct 444357 GAGAACGTCAAGCCGGGCATCAAGCCACGCTTTTTAAGCCAGAAGATCGAGGCGAACGAG 444416
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471
|| || |||||||| || || ||||| || || || | |||| || || | |||||
Sbjct 444417 CCGGAGAAGAAGATGCCCTCGACTGCGGCGAAAGCGACCAGTCGTTCCGCAAACACGGCG 444476
Query 33472 C---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
| ||| ||||| | ||||| |||||||||||
Sbjct 444477 CGAGGGTCCGAGATCCATCGCAGCGCCCACTCGGCCTTCTT 444517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946133202920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |