Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01- 27] 137 sequences; 21,492,894 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq83 89.7 4e-13 seq36 84.2 2e-11 >seq83 Length=1320507 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| |||||| | Sbjct 967980 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCG 967921 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| || || || |||||||| || Sbjct 967920 GACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGACCAG 967861 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| || || || | | | ||||||| || ||| Sbjct 967860 CAGCGCTTGATCTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACGCTCAGCGACTACAAC 967801 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || |||||| | ||| | ||||| || ||| | || || Sbjct 967800 ATCCAGAAGGAGTCTACACTCCATCTGGTGTTGAGGTTGCGCGGTGG 967754 >seq36 Length=702765 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104620 TTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAAGTCTTAAAA 104679 || ||||||||||||| || || | | |||||| ||||| || ||| | || | Sbjct 443993 TTGGTCTTGCCCTCCATCGAGATCATCTCCATAAAGTCGAACGGGTTCTCGGCATTGTAC 444052 Query 104680 TATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATGTACTCGCAC 104739 || |||| |||||| ||| | || ||| ||||| || || |||||||||| | | Sbjct 444053 AGCTTCTCGTTCCCAAGCGCGACAAGCAATCGGTCCGCGACGAACTCGATGTACTGTCGC 444112 Query 104740 ATAGAATGT-GCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaaaaaTCTTT 104798 || || || || |||||||| | || ||||||| || |||| || | || || | Sbjct 444113 AT-GAGGGTCGCGTTCATGCCGATCAAGCCGACGGGCAAGGCGTCCGTCAGGAATTCCTG 444171 Query 104799 CTCGATGTCCACGGCTTC 104816 |||||| || |||||||| Sbjct 444172 CTCGATCTCGACGGCTTC 444189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935282141235