Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq36 98.7 1e-15
seq2 84.2 3e-11
>seq36
Length=702765
Score = 98.7 bits (108), Expect = 1e-15
Identities = 361/556 (65%), Gaps = 16/556 (3%)
Strand=Plus/Plus
Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111
||| || |||| | || || || | ||| ||||| || || |||||||| || | ||
Sbjct 136288 CCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATCCAAAGGGCAAAGAA 136347
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
| || | | | ||||| || || ||||| || ||||||||| | |
Sbjct 136348 CAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAA 136407
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
|| || | |||||||| || | ||| ||||| | | || || || ||||| |||||
Sbjct 136408 GATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTCC 136467
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
||| || | ||| | || ||||| || || || | | ||| || || || || || ||
Sbjct 136468 CTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCGA 136527
Query 63292 TGTA-CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 63350
||| || || || || | ||| || || | || || || || || || || |
Sbjct 136528 -GTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGGC 136586
Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCC 63409
| || || |||||| | || ||||| | ||||| ||| || | ||| || |||||||||
Sbjct 136587 CGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCC 136645
Query 63410 TCTATACTATCATCCATCAT-GTTAAGTAGAA-AACAGCTAGACATTTGGTGACGACTAG 63467
|| || || ||| |||| || | | ||| || | ||| | || || | |
Sbjct 136646 TCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGAGCTGCGGGTGCGGC--G 136703
Query 63468 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGT 63527
| || || || || | || || || ||||| ||||| | || || | || ||||
Sbjct 136704 TGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTTGT 136763
Query 63528 ACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATT 63583
||||||| || || ||| || || || | |||| || || ||||| |||||
Sbjct 136764 ACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATG----CCGACCGCGACGCGCATG 136819
Query 63584 AACATGTGCTGAGGTC 63599
| ||||||||| ||||
Sbjct 136820 AGCATGTGCTGCGGTC 136835
>seq2
Length=1651214
Score = 84.2 bits (92), Expect = 3e-11
Identities = 116/162 (72%), Gaps = 3/162 (2%)
Strand=Plus/Plus
Query 32708 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 32767
||| || |||||||||||||| | ||| ||||| || ||||| || |||||||| || ||
Sbjct 1109063 GGAGAAGGTGAGTCCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGA 1109122
Query 32768 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 32827
|| || ||||| || || || || || || || || | || | ||| || | |||
Sbjct 1109123 GCCGGAGAAGAAGATGCCCTCGACGGCGGCGAACGCGACGAGACGCTCGCCGAAGACGGA 1109182
Query 32828 GCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
|| ||| | ||||| | | ||||| |||||||||||
Sbjct 1109183 GCGGTCGTCCGAGATCCAGGTGAGCGCCCACTCGGCCTTCTT 1109224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630914905200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |