Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq36 246 3e-60
>seq36
Length=702765
Score = 246 bits (272), Expect = 3e-60
Identities = 428/618 (69%), Gaps = 12/618 (2%)
Strand=Plus/Minus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||| | |||||| || || ||| ||||||||| ||| | || |||| ||| ||
Sbjct 136899 TACTTCGGCTTCAAGACGCTCGAGCGGTCGTACCTGCTCCGCCTCGACGGCAAGGTGGCC 136840
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATG--C 93841
||||||||||| || |||| ||||||||||| |||| || |||||| ||||||| |
Sbjct 136839 GAGCGACCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGAC 136780
Query 93842 CGAATGTTTTGCGGG-CTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCCACC 93897
|| | | || | | | || |||| ||| | |||| ||| || |
Sbjct 136779 CGCGCGAT---CGAGACGTACAACCTCATGTCGGA---GCGGTACTTTACGCACGCGTCG 136726
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
||||| || |||||||| || || ||| || ||| | || ||||| ||||| | |||
Sbjct 136725 CCGACGCTCTTCAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTCACG 136666
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| |||||| ||| || || | ||||| |||||| || ||| ||||||
Sbjct 136665 ATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCC 136606
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| || || || ||||| || ||||| || | || || | ||||| ||||||
Sbjct 136605 AAGACGGCAGGCGGCATCGGCCTCTCGATCCACAACATCCGCGCGACCGGTTCGTACATC 136546
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||| || || ||| ||| |||||| || |||| |||||||| || | ||||||| ||
Sbjct 136545 GCCGGCACGAACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACG 136486
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
||||||||||| |||||||| || | | | ||| | ||||| |||| ||||||
Sbjct 136485 GCGCGCTACGTCGACCAGGGAGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTCGAG 136426
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||||| ||| | | ||| ||||||| || |||||||||||||| || |
Sbjct 136425 CCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAG 136366
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
| | || | ||| | |||| || || ||| | || ||||| || ||| | || |||
Sbjct 136365 GTCCGCGCGCGCGACTTGTTCTTTGCCCTTTGGATCCCCGACCTCTTCATGGAGCGTGTC 136306
Query 94318 GAGAAAAACTCCGCCTGG 94335
||| | ||| || ||||
Sbjct 136305 GAGCAGAACGGCGACTGG 136288
Score = 145 bits (160), Expect = 8e-30
Identities = 239/334 (72%), Gaps = 8/334 (2%)
Strand=Plus/Minus
Query 95089 AACGCGCTGCTTGTG-GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147
||| |||| | |||| || || ||||| || ||||| || |||||||| ||| |||
Sbjct 135401 AACTCGCT-CGTGTGCGCGCCGATGCCTACCGCCTCGACCAGCCAGATCCTCGGCTTCAA 135343
Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207
|||| ||||||| || | ||| |||||| | |||| | | || || |||||||| || ||
Sbjct 135342 CGAGGCGTTCGAGCCGTACACGTCCAACATCTACACCCGCCGCGTCCTCGCCGGCGAGTT 135283
Query 95208 CCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACA 95266
|| ||| ||||| ||||| || ||||| | || | | || ||||| |||
Sbjct 135282 CCAGGTCGTCAACCCCTGGCTCCTCCGCGACCTCGTCGAC-CGCGGCCTGTGGAACGACG 135224
Query 95267 AGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325
| | |||||| | | ||||| ||||||||| |||||||| |||| || ||
Sbjct 135223 CGATGAAGAACACGATCAT-CGCGCACAACGGCTCGATCCAGAACGTCCCCGGCATCCCC 135165
Query 95326 GAGGACATCAAGGCGC-TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGA 95384
|| || ||||| ||| ||||||||||||||||||||||| |||| || | ||||
Sbjct 135164 GACGAGCTCAAG-CGCATCTACAAGACCGTGTGGGAGATCTCGCAAAAGGTCGTCATCGA 135106
Query 95385 CCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418
|| ||| |||| |||||| | |||||| ||||
Sbjct 135105 CCTCGCCGCCGACCGCGGCGCGTTCATCGACCAG 135072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722352786520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |