Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq83 122 8e-23
>seq83
Length=1320507
Score = 122 bits (134), Expect = 8e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| | ||||||||| ||||| || || || ||||| ||||| || || |||
Sbjct 967751 ATGCCACCGCGCAACCTCAACACCAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCG 967810
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|||| || | || || | || || || ||| | ||||| || |||||||| ||
Sbjct 967811 CTGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGA 967870
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || || ||||| || |||| || | || | |||||| ||||||||
Sbjct 967871 GGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAAGACTC 967929
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| || | || |||||||| || || || || || || |||||
Sbjct 967930 GACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 967980
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||||||||| | || ||| || || || || || || || ||||||||||||||
Sbjct 967456 ATGCCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATATTATAATCC 967515
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | || || | || || || ||| | ||||| || || ||||| ||
Sbjct 967516 GAAAGAGTACGACCGTCCTCGAGCTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCGGGA 967575
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || ||||| ||||| || |||| || | || | ||||||||| |||||
Sbjct 967576 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGACGACTC 967634
Query 45290 GACTTCGAGAGT 45301
||| ||||||||
Sbjct 967635 GACCTCGAGAGT 967646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002425944520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |