Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01- 27] 137 sequences; 21,492,894 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq36 141 1e-28 >seq36 Length=702765 Score = 141 bits (156), Expect = 1e-28 Identities = 485/747 (65%), Gaps = 17/747 (2%) Strand=Plus/Plus Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634 ||||| |||||||||||||||||| |||| | |||||||| ||| | || ||| | Sbjct 136095 TGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 136154 Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 || | ||| | | || | ||| || | || ||||| || |||||| ||||||| Sbjct 136155 CGGCGTACCAGAGCTTCTG-GGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 136213 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 ||| |||| | | ||||| || || | ||| |||||| || |||| | | Sbjct 136214 TTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCC 136273 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | || || ||| || |||| |||||| ||||| || ||| Sbjct 136274 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATC 136333 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 || |||| | || | || | || |||| || | || ||||| || | Sbjct 136334 CAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 136393 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933 || |||||||| | ||| || |||||||| ||||| || |||| |||| | ||| Sbjct 136394 TCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC--- 136450 Query 106934 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 | ||| || | || | || |||||||| ||| ||| | ||||| ||||| Sbjct 136451 GGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 136510 Query 106988 GGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCA 107045 || || || || | || | || || || || ||| ||| || | || | | Sbjct 136511 GGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAC--GAACCGGTCGCGCGGA 136568 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | ||||| | || || || || ||| ||| ||||| |||| ||| | | | Sbjct 136569 TGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGA 136628 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || | ||||| || | ||| ||||| ||||| | | || |||||||| || | Sbjct 136629 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGA 136688 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-T 107224 |||||| || || || || |||||||| || || | ||||| | || |||| Sbjct 136689 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACCGC 136747 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | ||||| || ||| ||||| | | |||||||| || ||||||||||||| Sbjct 136748 TCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACC 136807 Query 107285 GCCACACGCATAAACATGTATTGGGGT 107311 || || ||||| | ||||| || ||| Sbjct 136808 GCGACGCGCATGAGCATGTGCTGCGGT 136834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979789657880